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Basic Information
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CGSNL Gene Symbol
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FGL
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Gene Symbol Synonym
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fgl(fl), fl, fgl, OsFGL, OsPorB, PoPA, PORA, porA, OsPORA, PORB, OsPORB
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CGSNL Gene Name
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FADED GREEN LEAF
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Gene Name Synonym
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faded green leaf, NADPH: protochlorophyllide oxidoreductase B, NADPH-dependent protochlorophyllide oxidoreductase A
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Protein Name
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Allele
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fgl, osporB, fgl/osporB
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Chromosome No.
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10
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Explanation
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Q8W3D9 . Whitish yellow margin of leaves in the seedling stage and faded green leaves after the tillering stage. [131] PO:0009025; leaf. GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling. PoPA in Chen et al. 2013, Deng et al. 2014, Qiu et al. 2018, Huang et al. 2020, Liu et al. 2022. PORB in Inagaki et al. 2015, Yang et al. 2015 and Kong et al. 2016, Jin et al. 2021, Xu et al. 2022.
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Trait Class
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Biochemical character
Tolerance and resistance - Lesion mimic
Coloration - Chlorophyll
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK068143
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MSU ID
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LOC_Os10g35370.1
LOC_Os10g35370.2
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RAP ID
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Os10g0496900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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16.0
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Link map
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Classical linkage map
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References
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Lim C., Kim Y., Shim Y., Cho S.H., Yang T.J., Song Y.H., Kang K., Paek N.C.
Plant J. 2023
Rice OsGATA16 is a positive regulator for chlorophyll biosynthesis and chloroplast development.
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Guo F., Zhang P., Wu Y., Lian G., Yang Z., Liu W., Buerte B., Zhou C., Zhang W., Li D., Han N., Tong Z., Zhu M., Xu L., Chen M., Bian H.
Front Plant Sci 2022 13 887980
Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development.
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Lin X., Huang Y., Rao Y., Ouyang L., Zhou D., Zhu C., Fu J., Chen C., Yin J., Bian J., He H., Zou G., Xu J.
BMC Plant Biol. 2022 22(1) 612
A base substitution in OsphyC disturbs its Interaction with OsphyB and affects flowering time and chlorophyll synthesis in rice.
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Liu X., Deng X.J., Li C.Y., Xiao Y.K., Zhao K., Guo J., Yang X.R., Zhang H.S., Chen C.P., Luo Y.T., Tang Y.L., Yang B., Sun C.H., Wang P.R.
Int J Mol Sci 2022 23(10)
Mutation of Protoporphyrinogen IX Oxidase Gene Causes Spotted and rolled leaf and Its Overexpression Generates Herbicide Resistance in Rice.
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Zhang A., Jiang H., Chu H., Cao L., Chen J.
Curr Issues Mol Biol 2022 44(5) 2350-2361
Rice lesion mimic Gene Cloning and Association Analysis for disease resistance.
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Xu J., Ji Z., Wang C., Xu F., Wang F., Zheng Y., Tang Y., Wei Z., Zhao T., Zhao K.
Front Plant Sci 2022 13 918673
<i>WATER-SOAKED SPOT1</i> Controls Chloroplast Development and leaf senescence <i>via</i> Regulating Reactive Oxygen Species Homeostasis in Rice.
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Qiu Z., Chen D., Teng L., Guan P., Yu G., Zhang P., Song J., Zeng Q., Zhu L.
Rice (N Y) 2022 15(1) 50
OsWHY1 Interacts with OsTRX z and is Essential for Early Chloroplast Development in Rice.
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Zhou K., Zhang C., Xia J., Yun P., Wang Y., Ma T., Li Z.
Rice (N Y) 2021 14(1) 47
Albino seedling lethality 4; Chloroplast 30S Ribosomal Protein S1 is Required for Chloroplast Ribosome Biogenesis and Early Chloroplast Development in Rice.
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Wang Q., Zhu B., Chen C., Yuan Z., Guo J., Yang X., Wang S., Lv Y., Liu Q., Yang B., Sun C., Wang P., Deng X.
Rice (N Y) 2021 14(1) 50
A Single Nucleotide Substitution of GSAM Gene Causes Massive Accumulation of Glutamate 1-Semialdehyde and Yellow Leaf Phenotype in Rice.
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Jin X., Baysal C., Drapal M., Sheng Y., Huang X., He W., Shi L., Capell T., Fraser P.D., Christou P., Zhu C.
Plants (Basel) 2021 10(7)
The Coordinated Upregulated Expression of Genes Involved in MEP, Chlorophyll, Carotenoid and Tocopherol Pathways, Mirrored the Corresponding Metabolite Contents in Rice Leaves during De-Etiolation.
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Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
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Huang W., Zhang Y., Shen L., Fang Q., Liu Q., Gong C., Zhang C., Zhou Y., Mao C., Zhu Y., Zhang J., Chen H., Zhang Y., Lin Y., Bock R., Zhou F.
New Phytol. 2020
Accumulation of the RNA polymerase subunit RpoB depends on RNA editing by OsPPR16 and affects chloroplast development during early leaf development in rice.
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Lin D., Zhang L., Mei J., Chen J., Piao Z., Lee G., Dong Y.
Plant Biol (Stuttg) 2019 21(4) 585-594
Mutation of the rice TCM12 gene encoding 2,3-bisphosphoglycerate-independent phosphoglycerate mutase affects chlorophyll synthesis, photosynthesis and chloroplast development at seedling stage at low temperatures.
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Atul Prakash Sathe, Su X., Chen Z., Chen T., Wei X., Tang S., Xiao-Bo Zhang, Jian-Li Wu
Rice (N Y) 2019 12(1) 68
Identification and characterization of a spotted-leaf mutant spl40 with enhanced bacterial blight resistance in rice.
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Zhang Q., Shen L., Wang Z., Hu G., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Int J Mol Sci 2019 20(18)
OsCAF1, a CRM Domain Containing Protein, Influences Chloroplast Development.
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Cheng R., Gong L., Li Z., Liang Y.K.
J. Plant Physiol. 2019 232 39-50
Rice BIG gene is required for seedling viability.
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He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018 19(1)
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
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Lin D., Jiang Q., Ma X., Zheng K., Gong X., Teng S., Xu J., Dong Y.
G3 (Bethesda) 2018 8(1) 253-263
Rice <i>TSV3</i> Encoding Obg-Like GTPase Protein Is Essential for Chloroplast Development During the Early Leaf Stage Under Cold Stress.
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Lin D., Zheng K., Liu Z., Li Z., Teng S., Xu J., Dong Y.
Plant Genome 2018 11(1)
Rice <i>TCM1</i> Encoding a Component of the TAC Complex is Required for Chloroplast Development under Cold Stress.
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Qiu Z., Chen D., He L., Zhang S., Yang Z., Zhang Y., Wang Z., Ren D., Qian Q., Guo L., Zhu L.
Rice (N Y) 2018 11(1) 39
The rice white green leaf 2 gene causes defects in chloroplast development and affects the plastid ribosomal protein S9.
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Kwon C.T., Kim S.H., Song G., Kim D., Paek N.C.
Rice (N Y) 2017 10(1) 1
Two NADPH: Protochlorophyllide Oxidoreductase (POR) Isoforms Play Distinct Roles in Environmental Adaptation in Rice.
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Wang S., Lei C., Wang J., Ma J., Tang S., Wang C., Zhao K., Tian P., Zhang H., Qi C., Cheng Z., Zhang X., Guo X., Liu L., Wu C., Wan J.
J. Exp. Bot. 2017 68(5) 899-913
SPL33, encoding an eEF1A-like protein, negatively regulates cell death and defense responses in rice.
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Zhou F., Wang C.Y., Gutensohn M., Jiang L., Zhang P., Zhang D., Dudareva N., Lu S.
Proc. Natl. Acad. Sci. U.S.A. 2017 114(26) 6866-6871
A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice.
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Sheng Z., Lv Y., Li W., Luo R., Wei X., Xie L., Jiao G., Shao G., Wang J., Tang S., Hu P.
PLoS ONE 2017 12(5) e0177989
Yellow-Leaf 1 encodes a magnesium-protoporphyrin IX monomethyl ester cyclase, involved in chlorophyll biosynthesis in rice (Oryza sativa L.).
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Wang Y., Ren Y., Zhou K., Liu L., Wang J., Xu Y., Zhang H., Zhang L., Feng Z., Wang L., Ma W., Wang Y., Guo X., Zhang X., Lei C., Cheng Z., Wan J.
Front Plant Sci 2017 8 1116
WHITE STRIPE LEAF4 Encodes a Novel P-Type PPR Protein Required for Chloroplast Biogenesis during Early Leaf Development.
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Ge C., Wang L., Ye W., Wu L., Cui Y., Chen P., Pan J., Zhang D., Hu J., Zeng D., Dong G., Qian Q., Guo L., Xue D.
Sci Rep 2017 7(1) 3298
Single-point Mutation of an Histidine-aspartic Domain-containing Gene involving in Chloroplast Ribosome Biogenesis Leads to White Fine Stripe Leaf in Rice.
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Liu H., Li Q., Yang F., Zhu F., Sun Y., Tao Y., Lo C.
Plant Cell Physiol. 2016
Differential Regulation of protochlorophyllide oxidoreductase Abundances by VIRESCENT 5A (OsV5A) and VIRESCENT 5B (OsV5B) in Rice Seedlings.
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Kong W., Yu X., Chen H., Liu L., Xiao Y., Wang Y., Wang C., Lin Y., Yu Y., Wang C., Jiang L., Zhai H., Zhao Z., Wan J.
Plant Mol. Biol. 2016 92(1-2) 177-91
The catalytic subunit of magnesium-protoporphyrin IX monomethyl ester cyclase forms a chloroplast complex to regulate chlorophyll biosynthesis in rice.
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Zhu X., Guo S., Wang Z., Du Q., Xing Y., Zhang T., Shen W., Sang X., Ling Y., He G.
BMC Plant Biol. 2016 16(1) 134
Map-based cloning and functional analysis of ygl8, which controls leaf colour in rice (Oryza sativa).
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Li Y.Y., Shen A., Xiong W., Sun Q.L., Luo Q., Song T., Li Z.L., Luan W.J.
Rice (N Y) 2016 9(1) 46
Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
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Inagaki N., Kinoshita K., Kagawa T., Tanaka A., Ueno O., Shimada H., Takano M.
PLoS ONE 2015 10(8) e0135408
Phytochrome B Mediates the Regulation of Chlorophyll Biosynthesis through Transcriptional Regulation of ChlH and GUN4 in Rice Seedlings.
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WANG Zhong-wei, ZHANG Tian-quan, XING Ya-di ZENG Xiao-qin, WANG Ling, LIU Zhong-xian, SHI Jun-qiong, ZHU Xiao-yan, MA Ling, LI Yun-Feng, LING Ying-Hua, SANG Xian-chun, HE Guang-Hua
Journal of Integrative Agriculture 2015 15(5) 944-953
YGL9, encoding the putative chloroplast signal recognition particle 43 kDa protein in rice, is involved in chloroplast development
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Yang Y., Xu J., Huang L., Leng Y., Dai L., Rao Y., Chen L., Wang Y., Tu Z., Hu J., Ren D., Zhang G., Zhu L., Guo L., Qian Q., Zeng D.
J. Exp. Bot. 2015
PGL, encoding chlorophyllide a oxygenase 1, impacts leaf senescence and indirectly affects grain yield and quality in rice.
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Deng X.J., Zhang H.Q., Wang Y., He F., Liu J.L., Xiao X., Shu Z.F., Li W., Wang G.H., Wang G.L.
PLoS ONE 2014 9(6) e99564
Mapped clone and functional analysis of leaf-color gene ygl7 in a rice hybrid (Oryza sativa L. ssp. indica).
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Chen H., Cheng Z., Ma X., Wu H., Liu Y., Zhou K., Chen Y., Ma W., Bi J., Zhang X., Guo X., Wang J., Lei C., Wu F., Lin Q., Liu Y., Liu L., Jiang L.
Plant Cell Rep. 2013 32(12) 1855-67
A knockdown mutation of YELLOW-GREEN LEAF2 blocks chlorophyll biosynthesis in rice.
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Zhou K., Ren Y., Lv J., Wang Y., Liu F., Zhou F., Zhao S., Chen S., Peng C., Zhang X., Guo X., Cheng Z., Wang J., Wu F., Jiang L., Wan J.
Planta 2013 237(1) 279-92
Young leaf chlorosis 1, a chloroplast-localized gene required for chlorophyll and lutein accumulation during early leaf development in rice.
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Sakuraba Y., Rahman M.L., Cho S.H., Kim Y.S., Koh H.J., Yoo S.C., Paek N.C.
Plant J. 2013 74(1) 122-33
The rice faded green leaf locus encodes protochlorophyllide oxidoreductase B and is essential for chlorophyll synthesis under high light conditions.
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Yang Q. , He H. , Li H. , Tian H. , Zhang J. , Zhai L. , Chen J. , Wu H. , Yi G. , He Z.H. , Peng X.
PLoS One 2011 6(5) e20015
NOA1 Functions in a Temperature-Dependent Manner to Regulate Chlorophyll Biosynthesis and Rubisco Formation in Rice.
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Eguchi, T., M. Ashikari, A. Yoshimura and N. Iwata
Breeding Science 1998 48(Suppl. 1) 80
Loci of physiological and morphological characters on RFLP linkage map in rice.
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Kishimoto, N., E. Shimosaka, S. Matsuura and A. Saito
RGN 1992 9 118-124.
A current RFLP linkage map of rice Alignment of the molecular map with the classical map.
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Yano, M., A. Saito, A. Yoshimura, S. Kuhara, S. Yoshimura, O. Ikeda, N. Kishimoto, K. Saito, R. Ohsawa, K. Kawase, T. Nagamine, T. Ogawa, M. Nakagahra and N. Iwata
Japan. J. Breed. 1990 40(Suppl. 1) 468-469.
Chromosome identification of rice RFLP linkage groups.
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Iwata, N. and T. Omura
Jpn. J. Genet. 1984 59(3) 199-204.
Studies on the trisomics in rice plants (Oryza sativa L.). VI. An accomplishment of a trisomic series in japonica rice plants.
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Yoshimura, A., N. Iwata and T. Omura
Japan. J. Breed. 1982 32(4) 323-332.
Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L.). III. Marker genes located on chromosomes 2, 3, 4 and 7.
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Iwata, N. and T. Omura
J. Fac. Agr. Kyushu Univ. 1977 21 117-127.
Linkage studies in rice (Oryza sativa L.). On some mutants derived from chronic gamma irradiation.
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Iwata, N. and T. Omura
Japan. J. Breed. 1975 25(6) 363-368.
Studies on the trisomics in rice plants (Oryza sativa L.). III. Relation between trisomics and genetic linkage groups.
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Shinjyo, C.
Sci. Bull. Coll. Agr. Univ. Ryukyus 1975 22 1-57.
Genetical studies of cytoplasmic male sterility and fertility restoration in rice, Oryza sativa L.
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DB Reference
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Gramene ID
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GR:0060329
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Ontologies
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Gene Ontology
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chlorophyll biosynthetic process( GO:0015995 )
leaf development( GO:0048366 )
protochlorophyllide reductase activity( GO:0016630 )
nucleotide binding( GO:0000166 )
circadian rhythm( GO:0007623 )
response to light stimulus( GO:0009416 )
chloroplast organization( GO:0009658 )
photosynthesis( GO:0015979 )
chloroplast( GO:0009507 )
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Trait Ontology
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mimic response( TO:0000063 )
chlorophyll content( TO:0000495 )
leaf lamina color( TO:0000299 )
carotenoid content( TO:0000496 )
leaf color( TO:0000326 )
light sensitivity( TO:0000075 )
chlorophyll ratio( TO:0000298 )
leaf development trait( TO:0000655 )
chloroplast development trait( TO:0002715 )
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Plant Ontology
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leaf development stage( PO:0001050 )
vascular leaf( PO:0009025 )
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Related Strains
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Stocks for Genes
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2
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F Lines
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11
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Phenotype images
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Click to full size image in new window
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Photo from
A. Yoshimura
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Last updated
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Mar 6, 2025
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Update info.