|
Basic Information
|
|
CGSNL Gene Symbol
|
CLF
|
|
Gene Symbol Synonym
|
OsSET24, SET24, OsSDG711, SDG711, EZ1, OsEZ1, OsCLF, OsPcG1, PcG1
|
|
CGSNL Gene Name
|
CURLY LEAF
|
|
Gene Name Synonym
|
SET protein 24, polycomb protein EZ1, SET DOMAIN GROUP 711, Polycomb group protein 1
|
|
Protein Name
|
SET PROTEIN 24
|
|
Allele
|
sdg711, Ossdg711, Ossdg711-2, Ossdg711-8
|
|
Chromosome No.
|
6
|
|
Explanation
|
Polycomb group protein, Enhancer of Zeste(E(z)) like gene, E(z)-like gene. AP005813, AP003044. J581043-FJ581047 and GQ407104-GQ407107 (indica and other wild rice species). H3K27 methyltransferase. a polycom repressive complex 2(PRC2) key subunit. GO:2000904: regulation of starch metabolic process. GO:0099402: plant organ development. TO:0000919: grain weight.
|
|
Trait Class
|
Vegetative organ - Leaf
Other
Reproductive organ - Heading date
Reproductive organ - panicle
Seed
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits - Endosperm
Seed - Morphological traits
Seed - Physiological traits - Storage substances
Character as QTL - Plant growth activity
Tolerance and resistance - Stress tolerance
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK111743
|
|
MSU ID
|
LOC_Os06g16390.1
|
|
RAP ID
|
Os06g0275500
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Shi Z., Cao J., Li C., Liu J., Yang X., Cheng X.
Plants (Basel) 2025 14(17)
Genome-Wide Analysis of the Rice PcG Gene Family and Its Involvement in Salt Response and Development.
|
|
Huang Y., Liu J., Cheng L., Xu D., Liu S., Hu H., Ling Y., Yang R., Zhang Y.
Plants (Basel) 2024 13(17)
Genome-Wide Analysis of the Histone Modification Gene (<i>HM</i>) Family and Expression Investigation during Anther Development in Rice (<i>Oryza sativa</i> L.).
|
|
Lu J., Jiang Z., Chen J., Xie M., Huang W., Li J., Zhuang C., Liu Z., Zheng S.
Plant Physiol. 2023
SET DOMAIN GROUP 711-mediated H3K27me3 methylation of cytokinin metabolism genes regulates organ size in rice.
|
|
Liu X., Luo J., Li T., Yang H., Wang P., Su L., Zheng Y., Bao C., Zhou C.
Rice (N Y) 2021 14(1) 25
SDG711 Is Involved in Rice Seed Development through Regulation of Starch Metabolism Gene Expression in Coordination with Other Histone Modifications.
|
|
Zhang P., Zhu C., Geng Y., Wang Y., Yang Y., Liu Q., Guo W., Chachar S., Riaz A., Yan S., Yang L., Yi K., Wu C., Gu X.
Plant Cell 2021
Rice and Arabidopsis homologs of yeast CHROMOSOME TRANSMISSION FIDELITY PROTEIN 4 commonly interact with Polycomb complexes but exert divergent regulatory functions.
|
|
Wang L., Yuan J., Ma Y., Jiao W., Ye W., Yang D.L., Yi C., Chen Z.J.
Mol Plant 2018 11(2) 300-314
Rice Interploidy Crosses Disrupt Epigenetic Regulation, Gene Expression, and Seed Development.
|
|
Huang X., Lu Z., Wang X., Ouyang Y., Chen W., Xie K., Wang D., Luo M., Luo J., Yao J.
Plant J. 2016
Imprinted gene OsFIE1 modulates rice seed development by influencing nutrient metabolism and modifying genome H3K27me3.
|
|
Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015 27(5) 1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
|
|
Chen X., Liu X., Zhao Y., Zhou D.X.
Sci Rep 2015 5 13251
Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice.
|
|
Ma K., Zhang D., Liu Y., Ouyang Y., Li J., Hu C., Yao J.
Plant Sci. 2015 234 86-96
Ectopic expression of EbFIE from apomictic Eulaliopsis binata in rice results in pleiotropic phenotypes likely due to interaction with OsCLF.
|
|
Kuang Q., Yu X., Peng X., Sun M.X.
Plant Methods 2015 11 49
The isolation of early nuclear endosperm of Oryza sativa to facilitate gene expression analysis and screening imprinted genes.
|
|
Liu X., Zhou C., Zhao Y., Zhou S., Wang W., Dao-Xiu Zhou
Front Plant Sci 2014 5 591
The rice enhancer of zeste [E(z)] genes SDG711 and SDG718 are respectively involved in long day and short day signaling to mediate the accurate photoperiod control of flowering time.
|
|
Lu Z., Huang X., Ouyang Y., Yao J.
PLoS ONE 2013 8(6) e65426
Genome-wide identification, phylogenetic and co-expression analysis of OsSET gene family in rice.
|
|
Nallamilli B.R., Zhang J., Mujahid H., Malone B.M., Bridges S.M., Peng Z.
PLoS Genet. 2013 9(3) e1003322
Polycomb group gene OsFIE2 regulates rice (Oryza sativa) seed development and grain filling via a mechanism distinct from Arabidopsis.
|
|
Zhang L., Cheng Z., Qin R., Qiu Y., Wang J.L., Cui X., Gu L., Zhang X., Guo X., Wang D., Jiang L., Wu C.Y., Wang H., Cao X., Wan J.
Plant Cell 2012 24(11) 4407-21
Identification and characterization of an epi-allele of FIE1 reveals a regulatory linkage between two epigenetic marks in rice.
|
|
Sanyal,A., Ammiraju,J.S., Lu,F., Yu,Y., Rambo,T., Currie,J., Kollura,K., Kim,H.R., Chen,J., Ma,J., San Miguel,P., Mingsheng,C., Wing,R.A. and Jackson,S.A.
Mol. Biol. Evol. 2010 27(11) 2487-2506
Orthologous Comparisons of the Hd1 Region across Genera Reveal Hd1 Gene Lability within Diploid Oryza Species and Disruptions to Microsynteny in Sorghum
|
|
Luo M,Platten D,Chaudhury A,Peacock WJ,Dennis ES
Mol Plant 2009 2(4) 711-23
Expression, imprinting, and evolution of rice homologs of the polycomb group genes.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
response to salt stress( GO:0009651 )
seed development( GO:0048316 )
endosperm development( GO:0009960 )
cytokinin catabolic process( GO:0009823 )
cytokinin biosynthetic process( GO:0009691 )
nucleus( GO:0005634 )
regulation of gene expression, epigenetic( GO:0040029 )
histone lysine methylation( GO:0034968 )
regulation of cell proliferation( GO:0042127 )
regulation of cell growth( GO:0001558 )
regulation of multicellular organism growth( GO:0040014 )
cytokinin metabolic process( GO:0009690 )
starch metabolic process( GO:0005982 )
DNA binding( GO:0003677 )
single-stranded RNA binding( GO:0003727 )
genetic imprinting( GO:0006349 )
leaf morphogenesis( GO:0009965 )
vegetative to reproductive phase transition( GO:0010228 )
histone methylation( GO:0016571 )
PcG protein complex( GO:0031519 )
transcription factor activity( GO:0003700 )
DNA methylation( GO:0006306 )
vernalization response( GO:0010048 )
flower development( GO:0009908 )
inflorescence development( GO:0010229 )
long-day photoperiodism, flowering( GO:0048574 )
regulation of long-day photoperiodism, flowering( GO:0048586 )
DNA mediated transformation( GO:0009294 )
gene silencing by RNA( GO:0031047 )
negative regulation of molecular function, epigenetic( GO:0045857 )
histone H3-K9 methylation( GO:0051567 )
|
|
Trait Ontology
|
panicle size( TO:0006032 )
flowering time( TO:0002616 )
inflorescence development trait( TO:0000621 )
seed development trait( TO:0000653 )
starch content( TO:0000696 )
seed size( TO:0000391 )
plant height( TO:0000207 )
leaf size( TO:0002637 )
stem thickness( TO:0000339 )
grain size( TO:0000397 )
cytokinin content( TO:0002660 )
panicle length( TO:0000040 )
panicle number( TO:0000152 )
grain weight( TO:0000590 )
internode length( TO:0000145 )
basal internode diameter( TO:0000132 )
flag leaf lamina width( TO:0002758 )
small vascular bundle number( TO:0000558 )
endospermless( TO:0000231 )
large vascular bundle number( TO:0000539 )
growth and development trait( TO:0000357 )
salt tolerance( TO:0006001 )
|
|
Plant Ontology
|
inflorescence meristem( PO:0000230 )
endosperm( PO:0009089 )
tegmen( PO:0020056 )
inflorescence development stage( PO:0001083 )
seed development stage( PO:0001170 )
endosperm development stage( PO:0007633 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jan 15, 2026
|
Update info.