Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
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| CGSNL Gene Symbol | EMF2A |
| Gene Symbol Synonym | OsEMF2a, OsEMF2, EMF2 |
| CGSNL Gene Name | EMBRYONIC FLOWER 2A |
| Gene Name Synonym | EMBRYONIC FLOWER 2, Embryonic Flower2a |
| Protein Name | |
| Allele | osemf2a, osemf2a-1, osemf2a-2, emf2a, emf2a-3, emf2a-4, emf2a-5 |
| Chromosome No. | 4 |
| Explanation | a component of PRC2 (Polycomb repressive complex 2). Polycomb group protein, Supressor of Zeste(12) homolog. a rice homolog of the Arabidopsis PcG gene Embryonic Flower2 (EMF2). Q0JF48. AY321106. KC609074-KC609086 (O. sativa and wild rice species, partial cds). ROS1a Target gene. PO:0030123: panicle inflorescence. PO:0030104: caryopsis fruit. TO:0001109: grain color trait. GO:0106185: histone H3-K37 methylation. GO:0071514: genetic imprinting. GO:0010342: endosperm cellularization. |
| Trait Class |
Seed - Morphological traits - Endosperm
Seed - Morphological traits - Embryo Seed - Physiological traits - Storage substances Seed - Morphological traits Reproductive organ - Heading date |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK120470
AK069556 |
| MSU ID |
LOC_Os04g08034.1
LOC_Os04g08034.2 LOC_Os04g08034.3 LOC_Os04g08034.4 LOC_Os04g08034.5 LOC_Os04g08034.6 |
| RAP ID |
Os04g0162100 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Cheng X., Pan M., E Z., Zhou Y., Niu B., Chen C.
Plant Commun 2021 2(1) 100092 The maternally expressed polycomb group gene <i>OsEMF2a</i> is essential for endosperm cellularization and imprinting in rice.
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Tonosaki K., Ono A., Kunisada M., Nishino M., Nagata H., Sakamoto S., Kijima S.T., Furuumi H., Nonomura K.I., Sato Y., Ohme-Takagi M., Endo M., Comai L., Hatakeyama K., Kawakatsu T., Kinoshita T.
Plant Cell 2021 33(1) 85-103 Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice.
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Kim M.Y., Ono A., Scholten S., Kinoshita T., Zilberman D., Okamoto T., Fischer R.L.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(19) 9652-9657 DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm.
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Zhu,T., Xu,P.Z., Liu,J.P., Peng,S., Mo,X.C. and Gao,L.Z.
Mol. Phylogenet. Evol. 2014 70 348-361 Phylogenetic relationships and genome divergence among the AA- genome species of the genus Oryza as revealed by 53 nuclear genes and 16 intergenic regions
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Luo M,Platten D,Chaudhury A,Peacock WJ,Dennis ES
Mol Plant 2009 2(4) 711-23 Expression, imprinting, and evolution of rice homologs of the polycomb group genes.
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Li,K., Yang,J., Liu,J., Du,X., Wei,C., Su,W., He,G., Zhang,Q., Hong,F. and Qian,X.
DNA Seq. 2006 17(1) 74-78 Cloning, characterization and tissue-specific expression of a cDNA encoding a novel EMBRYONIC FLOWER 2 gene (OsEMF2) in Oryza sativa.
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| TextPresso Search | Search textpresso for EMF2A ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
cellularization( GO:0007349 )
endosperm development( GO:0009960 ) intracellular( GO:0005622 ) genetic imprinting( GO:0006349 ) zinc ion binding( GO:0008270 ) regulation of auxin biosynthetic process( GO:0010600 ) regulation of starch biosynthetic process( GO:0010581 ) seed maturation( GO:0010431 ) embryonic development( GO:0009790 ) cytokinin biosynthetic process( GO:0009691 ) regulation of cell cycle( GO:0051726 ) seed development( GO:0048316 ) nucleus( GO:0005634 ) multicellular organismal development( GO:0007275 ) chromatin organization( GO:0006325 ) cell differentiation( GO:0030154 ) metal ion binding( GO:0046872 ) chromatin DNA binding( GO:0031490 ) cellularization of endosperm( GO:0010342 ) negative regulation of flower development( GO:0009910 ) |
| Trait Ontology |
flower development trait( TO:0000622 )
shoot apical meristem development( TO:0006020 ) seed development trait( TO:0000653 ) days to heading( TO:0000137 ) endosperm color( TO:0000487 ) seed viability( TO:0000345 ) embryo development trait( TO:0000620 ) endosperm storage protein content( TO:0002653 ) seed maturation( TO:0002661 ) starch content( TO:0000696 ) sucrose content( TO:0000328 ) fructose content( TO:0006005 ) glucose content( TO:0000300 ) cytokinin content( TO:0002660 ) auxin content( TO:0002672 ) |
| Plant Ontology |
seed development stage( PO:0001170 )
endosperm( PO:0009089 ) shoot system( PO:0009006 ) root( PO:0009005 ) leaf( PO:0025034 ) inflorescence( PO:0009049 ) pollen( PO:0025281 ) plant embryo stage( PO:0007631 ) endosperm development stage( PO:0007633 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Sep 6, 2021 | |
