Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol FKF1
Gene Symbol Synonym OsFbox609, Os_F0370, OsFKF1, OsFBO10, FBO10
CGSNL Gene Name FLAVIN-BINDING, KELCH REPEAT, F BOX 1
Gene Name Synonym F-box protein 609, "FLAVIN-BINDING, KELCH REPEAT, F-BOX 1", F-box-type E3 ubiquitin ligase O10
Protein Name
Allele osfkf1
Chromosome No. 11
Explanation LOV, F-box, Kelch repeat. a rice ortholog of Arabidopsis gene for circadian clock component.
Trait Class Reproductive organ - Heading date
Expression
Sequence/Locus
cDNA Accession No. AK100677
MSU ID LOC_Os11g34460.1
LOC_Os11g34460.2
LOC_Os11g34460.3
RAP ID Os11g0547000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Yin M., Ma H., Wang M., Chu G., Liu Y., Xu C., Zhang X., Wang D., Chen S.
Sci Rep 2021  11(1)  15026
Transcriptome analysis of flowering regulation by sowing date in Japonica Rice (Oryza sativa L.).
Wei H., Wang X., He Y., Xu H., Wang L.
EMBO J. 2021  40(3)  e105086
Clock component OsPRR73 positively regulates rice salt tolerance by modulating OsHKT2;1-mediated sodium homeostasis.
Minh-Thu PT., Kim J.S., Chae S., Jun K.M., Lee G.S., Kim D.E., Cheong J.J., Song S.I., Nahm B.H., Kim Y.K.
Mol. Cells 2018  41(8)  781-798
A WUSCHEL Homeobox Transcription Factor, OsWOX13, Enhances Drought Tolerance and Triggers Early Flowering in Rice.
Matsuzaki J., Kawahara Y., Izawa T.
Plant Cell 2015  27(3)  633-48
Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions.
Han S.H., Yoo S.C., Lee B.D., An G., Paek N.C.
Plant Cell Environ. 2015   
Rice FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 (OsFKF1) promotes flowering independent of photoperiod.
Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011  6(1)  e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(3)  835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
Yang X., Udaya C Kalluri, Jawdy S., Lee E Gunter, Yin T., Timothy J Tschaplinski, David J Weston, Ranjan P., Gerald A Tuskan
Plant Physiol. 2008  148(3)  1189-200
The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants.
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007  143(4)  1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
Murakami M, Tago Y, Yamashino T, Mizuno T.
Plant Cell Physiol. 2007  48(1)  110-21
Comparative Overviews of Clock-Associated Genes of Arabidopsis thaliana and Oryza sativa.
DB Reference
Gramene ID -
Ontologies
Gene Ontology photoperiodism, flowering( GO:0048573 )
response to temperature stimulus( GO:0009266 )
response to light stimulus( GO:0009416 )
circadian rhythm( GO:0007623 )
vegetative to reproductive phase transition( GO:0010228 )
Trait Ontology flowering time( TO:0002616 )
days to heading( TO:0000137 )
temperature response trait( TO:0000432 )
light sensitivity( TO:0000075 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 1, 2023

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