Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SDR4
Gene Symbol Synonym Sdr4, OsSdr4, OsSdr4-n, OsSdr4-k, OsSdr4L, Sdr4L
CGSNL Gene Name SEED DORMANCY 4
Gene Name Synonym Sdr4-like
Protein Name
Allele Sdr4-n, Sdr4-k, Sdr4-k'
Chromosome No. 7
Explanation AB506455(Sdr4-k, Kasalath), AB510199(Sdr4-n, Nipponbare), PO:0009010; seed. GRO:0007045; 09-mature grain stage. Putative zinc finger protein. Pre-harvest sprouting resistance. GO:2000033: regulation of seed dormancy process.
Trait Class Seed - Physiological traits - Dormancy
Character as QTL - Germination
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os07g39700.1
RAP ID Os07g0585700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Bataller S., Davis J.A., Gu L., Baca S., Chen G., Majid A., Villacastin A.J., Barth D., Han M.V., Rushton P.J., Shen Q.J.
BMC Plant Biol. 2024  24(1)  1090
Disruption of the OsWRKY71 transcription factor gene results in early rice seed germination under normal and cold stress conditions.
Guo F., Zhang P., Wu Y., Lian G., Yang Z., Liu W., Buerte B., Zhou C., Zhang W., Li D., Han N., Tong Z., Zhu M., Xu L., Chen M., Bian H.
Front Plant Sci 2022  13  887980
Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development.
Subburaj S., Cao S., Xia X., He Z.
PLoS ONE 2016  11(6)  e0153717
Phylogenetic Analysis, Lineage-Specific Expansion and Functional Divergence of seed dormancy 4-Like Genes in Plants.
Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015   
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
Zhang Y., Miao X., Xia X., He Z.
Theor. Appl. Genet. 2014  127(4)  855-66
Cloning of seed dormancy genes (TaSdr) associated with tolerance to pre-harvest sprouting in common wheat and development of a functional marker.
Sugimoto,K., Takeuchi,Y., Ebana,K., Miyao,A., Hirochika,H., Hara,N., Ishiyama,K., Kobayashi,M., Ban,Y., Hattori,T. and Yano,M.
Proc. Natl. Acad. Sci. U.S.A. 2010  107(13)  5792-5797
Molecular cloning of Sdr4, a regulator involved in seed dormancy and domestication of rice
DB Reference
Gramene ID GR:0060859
Ontologies
Gene Ontology abscisic acid mediated signaling( GO:0009738 )
seed germination( GO:0009845 )
seed dormancy( GO:0010162 )
seed germination on parent plant( GO:0048623 )
Trait Ontology seed dormancy( TO:0000253 )
abscisic acid sensitivity( TO:0000615 )
vivipary( TO:0000619 )
Plant Ontology seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
May 23, 2025

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