Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SDR4
Gene Symbol Synonym Sdr4, OsSdr4, OsSdr4-n, OsSdr4-k, OsSdr4L, Sdr4L
CGSNL Gene Name SEED DORMANCY 4
Gene Name Synonym Sdr4-like
Protein Name
Allele Sdr4-n, Sdr4-k, Sdr4-k'
Chromosome No. 7
Explanation AB506455(Sdr4-k, Kasalath), AB510199(Sdr4-n, Nipponbare), PO:0009010; seed. GRO:0007045; 09-mature grain stage. Putative zinc finger protein. Pre-harvest sprouting resistance. LOC_Os07g39700.
Trait Class Seed - Physiological traits - Dormancy
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os07g39700.1
RAP ID Os07g0585700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Subburaj S., Cao S., Xia X., He Z.
PLoS ONE 2016  11(6)  e0153717
Phylogenetic Analysis, Lineage-Specific Expansion and Functional Divergence of seed dormancy 4-Like Genes in Plants.
Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015   
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
Zhang Y., Miao X., Xia X., He Z.
Theor. Appl. Genet. 2014  127(4)  855-66
Cloning of seed dormancy genes (TaSdr) associated with tolerance to pre-harvest sprouting in common wheat and development of a functional marker.
Sugimoto,K., Takeuchi,Y., Ebana,K., Miyao,A., Hirochika,H., Hara,N., Ishiyama,K., Kobayashi,M., Ban,Y., Hattori,T. and Yano,M.
Proc. Natl. Acad. Sci. U.S.A. 2010  107(13)  5792-5797
Molecular cloning of Sdr4, a regulator involved in seed dormancy and domestication of rice
TextPresso Search Search textpresso for SDR4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060859
Ontologies
Gene Ontology abscisic acid mediated signaling( GO:0009738 )
seed germination( GO:0009845 )
Trait Ontology seed dormancy( TO:0000253 )
abscisic acid sensitivity( TO:0000615 )
vivipary( TO:0000619 )
Plant Ontology seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
Oct 4, 2016


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