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Basic Information
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CGSNL Gene Symbol
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YL1
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Gene Symbol Synonym
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MTC, OsMTC, YGL8, OsYGL8, OsCRD1, CRD1, OsCRD, CRD, YL-1, PNZIP, OsPNZIP
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CGSNL Gene Name
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YELLOW-LEAF 1
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Gene Name Synonym
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Mg-Proto IX monomethylester cyclase, yellow-green leaf 8, Copper Response Defect 1, Yellow-Leaf 1, PHARBITIS NIL LEUCINE ZIPPER
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Protein Name
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PHARBITIS NIL LEUCINE ZIPPER
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Allele
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ygl8, yl-1
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Chromosome No.
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1
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Explanation
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GO:0036068: light-independent chlorophyll biosynthetic process. GO:1901401: regulation of tetrapyrrole metabolic process. a catalytic subunit of magnesium-protoporphyrin IX monomethyl ester cyclase (MgPME cyclase). TO:0006060: leaf chlorosis.
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Trait Class
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Coloration - Chlorophyll
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK069333
AK058287
AK059435
AK061646
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MSU ID
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LOC_Os01g17170.1
LOC_Os01g17170.2
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RAP ID
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Os01g0279100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cao W., Zhang H., Zhou Y., Zhao J., Lu S., Wang X., Chen X., Yuan L., Guan H., Wang G., Shen W., De Vleesschauwer D., Li Z., Shi X., Gu J., Guo M., Feng Z., Chen Z., Zhang Y., Pan X., Liu W., Liang G., Yan C., Hu K., Liu Q., Zuo S.
Plant Biotechnol. J. 2022 20(2) 335-349
Suppressing chlorophyll degradation by silencing OsNYC3 improves rice resistance to Rhizoctonia solani, the causal agent of sheath blight.
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Li J., Zhao T., Chen L., Chen H., Luo D., Chen C., Miao Y., Liu D.
BMC Plant Biol. 2022 22(1) 368
Artemisia argyi allelopathy: a generalist compromises hormone balance, element absorption, and photosynthesis of receptor plants.
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Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
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Zhu X., Mou C., Zhang F., Huang Y., Yang C., Ji J., Liu X., Cao P., Nguyen T., Lan J., Zhou C., Liu S., Jiang L., Wan J.
Rice (N Y) 2020 13(1) 45
WSL9 Encodes an HNH endonuclease domain-containing protein that Is Essential for Early Chloroplast Development in Rice.
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Liu Z., Wang Z., Gu H., You J., Hu M., Zhang Y., Zhu Z., Wang Y., Liu S., Chen L., Liu X., Tian Y., Zhou S., Jiang L., Liu L., Wan J.
Front Plant Sci 2018 9 782
Identification and Phenotypic Characterization of <i>ZEBRA LEAF16</i> Encoding a beta-hydroxyacyl-ACP dehydratase in Rice.
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Sheng Z., Lv Y., Li W., Luo R., Wei X., Xie L., Jiao G., Shao G., Wang J., Tang S., Hu P.
PLoS ONE 2017 12(5) e0177989
Yellow-Leaf 1 encodes a magnesium-protoporphyrin IX monomethyl ester cyclase, involved in chlorophyll biosynthesis in rice (Oryza sativa L.).
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Wang X., Huang R., Quan R.
PLoS ONE 2017 12(1) e0171118
Mutation in Mg-protoporphyrin IX monomethyl ester cyclase Decreases Photosynthesis Capacity in Rice.
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Kong W., Yu X., Chen H., Liu L., Xiao Y., Wang Y., Wang C., Lin Y., Yu Y., Wang C., Jiang L., Zhai H., Zhao Z., Wan J.
Plant Mol. Biol. 2016 92(1-2) 177-91
The catalytic subunit of magnesium-protoporphyrin IX monomethyl ester cyclase forms a chloroplast complex to regulate chlorophyll biosynthesis in rice.
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Inagaki N., Kinoshita K., Kagawa T., Tanaka A., Ueno O., Shimada H., Takano M.
PLoS ONE 2015 10(8) e0135408
Phytochrome B Mediates the Regulation of Chlorophyll Biosynthesis through Transcriptional Regulation of ChlH and GUN4 in Rice Seedlings.
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Maas LF,McClung A,McCouch S
Theor. Appl. Genet. 2010 120(5) 895-908
Dissection of a QTL reveals an adaptive, interacting gene complex associated with transgressive variation for flowering time in rice.
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Thomson MJ, Edwards JD, Septiningsih EM, Harrington SE, McCouch SR.
Genetics 2006 172(4) 2501-2514
Substitution mapping of dth1.1, a flowering-time quantitative trait locus (QTL) associated with transgressive variation in rice, reveals multiple sub-QTL.
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TextPresso Search
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Search textpresso for YL1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to other organism( GO:0051707 )
defense response to fungus( GO:0050832 )
unsaturated fatty acid biosynthetic process( GO:0006636 )
thylakoid membrane organization( GO:0010027 )
rRNA processing( GO:0006364 )
response to light stimulus( GO:0009416 )
photosystem II assembly( GO:0010207 )
oxylipin biosynthetic process( GO:0031408 )
isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway( GO:0019288 )
magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity( GO:0048529 )
chlorophyll biosynthetic process( GO:0015995 )
iron ion binding( GO:0005506 )
DNA binding( GO:0003677 )
chloroplast organization( GO:0009658 )
cysteine biosynthetic process( GO:0019344 )
regulation of lipid metabolic process( GO:0019216 )
chloroplast thylakoid( GO:0009534 )
chloroplast( GO:0009507 )
photosynthesis( GO:0015979 )
chloroplast envelope( GO:0009941 )
plastid membrane organization( GO:0009668 )
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Trait Ontology
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chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
chlorophyll ratio( TO:0000298 )
leaf color( TO:0000326 )
chloroplast development trait( TO:0002715 )
photosynthetic ability( TO:0000316 )
sheath blight disease resistance( TO:0000255 )
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Plant Ontology
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stem( PO:0009047 )
leaf( PO:0025034 )
inflorescence( PO:0009049 )
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Related Strains
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Phenotype images
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Last updated
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Dec 5, 2022
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