Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol EP2
Gene Symbol Synonym ep2, EP2/DEP2/SRS1, SRS1/DEP2, DEP2, SRS1, OsSRS1, CL7(t), OsRELA, RELA
Gene Name Synonym erect panical 2, Erect panicle2, erect panicle2-1, erect panicle2-2, dense and erect panicle 2, small and round seed 1, cleistogamy 7, cleistogamy gene on chromosome 7, regulator of leaf angle
Protein Name
Allele ep2-1, ep2-2, dep2, dep2-1, dep2-2, srs1, srs1-1, srs1-2, srs1-3, srs1-4, srs1-5, cl7(t), rela
Chromosome No. 7
Explanation GQ449684. TO:0000800: inflorescence density (panicle density), TO:0000847: panicle anatomy and morphology trait. TO:0000756: stem internode anatomy and morphology trait. TO:0000882: cleistogamous flower. TO:0000975: grain width.
Trait Class Vegetative organ - Leaf
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
cDNA Accession No. AK120310
MSU ID LOC_Os07g42410.1
RAP ID Os07g0616000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Wang Y., Lv Y., Yu H., Hu P., Wen Y., Wang J., Tan Y., Wu H., Zhu L., Wu K., Chai B., Liu J., Zeng D., Zhang G., Zhu L., Gao Z., Dong G., Ren D., Shen L., Zhang Q., Li Q., Guo L., Xiong G., Qian Q., Hu J.
Plant Commun 2023    100673
GR5 acts in the G protein pathway to regulate grain size in rice.
Jin S.K., Zhang M.Q., Leng Y.J., Xu L.N., Jia S.W., Wang S.L., Song T., Wang R.A., Yang Q.Q., Tao T., Cai X.L., Gao J.P.
Front Plant Sci 2022  13  905148
<i>OsNAC129</i> Regulates Seed Development and Plant Growth and Participates in the Brassinosteroid Signaling Pathway.
Zhu C.L., Xing B., Teng S.Z., Deng C., Shen Z.Y., Ai P.F., Lu T.G., Zhang S.W., Zhang Z.G.
Front Plant Sci 2021  12  760041
OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice.
Chun Y., Fang J., Zafar S.A., Shang J., Zhao J., Yuan S., Li X.
Rice (N Y) 2020  13(1)  7
MINI SEED 2 (MIS2) Encodes a Receptor-like Kinase that Controls grain size and Shape in Rice.
Wang M., Yu Y., Haberer G., Marri P.R., Fan C., Goicoechea J.L., Zuccolo A., Song X., Kudrna D., Ammiraju J.S., Cossu R.M., Maldonado C., Chen J., Lee S., Sisneros N., de Baynast K., Golser W., Wissotski M., Kim W., Sanchez P., Ndjiondjop M.N., Sanni K., Long M., Carney J., Panaud O., Wicker T., Machado C.A., Chen M., Mayer K.F., Rounsley S., Wing R.A.
Nat. Genet. 2014  46(9)  982-8
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.
Ni D.H., Li J., Duan Y.B., Yang Y.C., Wei P.C., Xu R.F., Li C.R., Liang D.D., Li H., Song F.S., Ni J.L., Li L., Yang J.B.
J. Exp. Bot. 2014  65(8)  2107-17
Identification and utilization of cleistogamy gene cl7(t) in rice (Oryza sativa L.).
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013  16(2)  213-20
Genes offering the potential for designing yield-related traits in rice.
Zhu K,Tang D,Yan C,Chi Z,Yu H,Chen J,Liang J,Gu M,Cheng Z
Genetics 2010  184(2)  343-50.
ERECT PANICAL2 Encodes a Novel Protein That Regulates Panicle Erectness in Indica Rice.
Li F., Liu W., Tang J., CHEN J., Tong H., Hu B., Li C., Fang J., Chen M., Chu C
Cell Res. 2010  20  839-849
Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation.
Abe Y., Mieda K., Ando T., Kono I., Yano M., Kitano H., Iwasaki Y.
Genes Genet. Syst. 2010  85(5)  327-39
The SMALL AND ROUND SEED1 (SRS1/DEP2) gene is involved in the regulation of seed size in rice.
TextPresso Search Search textpresso for EP2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology regulation of transcription, DNA-dependent( GO:0006355 )
nucleus( GO:0005634 )
Trait Ontology grain size( TO:0000397 )
grain length( TO:0000734 )
plant height( TO:0000207 )
inflorescence branching( TO:0000050 )
grain number( TO:0002759 )
vascular bundle number( TO:0000472 )
stem thickness( TO:0000339 )
panicle length( TO:0000040 )
secondary branch number( TO:0000557 )
spikelet fertility( TO:0000180 )
grain width( TO:0000402 )
1000-seed weight( TO:0000382 )
stem strength( TO:0000051 )
leaf size( TO:0002637 )
lemma and palea anatomy and morphology trait( TO:0000079 )
leaf angle( TO:0000206 )
leaf lamina joint bending( TO:0002688 )
Plant Ontology spikelet floret( PO:0009082 )
stem( PO:0009047 )
vascular bundle( PO:0005020 )
leaf sheath( PO:0020104 )
root( PO:0009005 )
Related Strains
Phenotype images
Last updated
Jan 12, 2024