Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol EL5
Gene Symbol Synonym EL5.1, EL5.2, EL5.3, EL5.4, EL5.5, EL5.6, OsRING64, RING64
CGSNL Gene Name ELICITOR 5
Gene Name Synonym E3 ubiquitin-protein ligase EL5, RING-type E3 ubiquitin ligase 64
Protein Name E3 UBIQUITIN-PROTEIN LIGASE EL5
Allele
Chromosome No. 2
Explanation AB045120. Q9LRB7. ATL family, RING-H2 TYPE UBIQUITIN LIASE. EC=6.3.2.- GO:0061630: ubiquitin protein ligase activity.
Trait Class Biochemical character
Vegetative organ - Root
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK243670
MSU ID LOC_Os02g35329.1
RAP ID Os02g0559800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu W.Z., Li Z.Y., Liu C., Yu X.T., Yu W.Q., Li P.
Genome 2023  66(6)  131-149
<i>Paenibacillus terrae</i> NK3-4 regulates the transcription of growth-related and stress resistance-related genes in rice.
Zhu J.N., Yu Y.J., Dai M.D., Zeng Y.L., Lu X.J., Wang L., Liu X.H., Su Z.Z., Lin F.C.
Front Microbiol 2022  13  845104
A New Species in <i>Pseudophialophora</i> From Wild Rice and Beneficial Potential.
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Nishizawa Y., Mochizuki S., Koiwai H., Kondo K., Kishimoto K., Katoh E., Minami E.
Plant Signal Behav 2015  10(3)  e990801
Rice ubiquitin ligase EL5 prevents root meristematic cell death under high nitrogen conditions and interacts with a cytosolic GAPDH.
Koiwai H,Tagiri A,Katoh S,Katoh E,Ichikawa H,Minami E,Nishizawa Y
Plant J. 2007  51  92-104
RING-H2 type ubiquitin ligase EL5 is involved in root development through the maintenance of cell viability in rice.
Takai,R., Matsuda,N., Nakano,A., Hasegawa,K., Akimoto,C., Shibuya,N. and Minami,E.
Plant J. 2002  30(4)  447-455
EL5, a rice N-acetylchitooligosaccharide elicitor-responsive RING-H2 finger protein, is a ubiquitin ligase which functions in vitro in co-operation with an elicitor-responsive ubiquitin-conjugating enzyme, OsUBC5b.
Takai R, Hasegawa K, Kaku H, Shibuya N, Minami E.
Plant Sci. 2001  160(4)  577-583
Isolation and analysis of expression mechanisms of a rice gene, EL5, which shows structural similarity to ATL family from Arabidopsis, in response to N-acetylchitooligosaccharide elicitor.
DB Reference
Gramene ID -
Ontologies
Gene Ontology ubiquitin-dependent protein catabolic process( GO:0006511 )
root development( GO:0048364 )
protein ubiquitination( GO:0016567 )
cell division( GO:0051301 )
ubiquitin-protein ligase activity( GO:0004842 )
metal ion binding( GO:0046872 )
plasma membrane( GO:0005886 )
membrane( GO:0016020 )
response to bacterium( GO:0009617 )
response to symbiotic bacterium( GO:0009609 )
response to fungus( GO:0009620 )
protein binding( GO:0005515 )
cell death( GO:0008219 )
zinc ion binding( GO:0008270 )
cytokinin mediated signaling( GO:0009736 )
integral to membrane( GO:0016021 )
ligase activity( GO:0016874 )
modification-dependent protein catabolic process( GO:0019941 )
response to nitrite( GO:0080033 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 12, 2023

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