Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol EL5
Gene Symbol Synonym EL5.1, EL5.2, EL5.3, EL5.4, EL5.5, EL5.6
CGSNL Gene Name ELICITOR 5
Gene Name Synonym E3 ubiquitin-protein ligase EL5
Protein Name E3 UBIQUITIN-PROTEIN LIGASE EL5
Allele
Chromosome No. 2
Explanation AB045120. ATL family, RING-H2 TYPE UBIQUITIN LIASE. Q9LRB7. EC=6.3.2.-
Trait Class Biochemical character
Vegetative organ - Root
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK243670
MSU ID LOC_Os02g35329.1
RAP ID Os02g0559800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Nishizawa Y., Mochizuki S., Koiwai H., Kondo K., Kishimoto K., Katoh E., Minami E.
Plant Signal Behav 2015  10(3)  e990801
Rice ubiquitin ligase EL5 prevents root meristematic cell death under high nitrogen conditions and interacts with a cytosolic GAPDH.
Koiwai H,Tagiri A,Katoh S,Katoh E,Ichikawa H,Minami E,Nishizawa Y
Plant J. 2007  51  92-104
RING-H2 type ubiquitin ligase EL5 is involved in root development through the maintenance of cell viability in rice.
Takai,R., Matsuda,N., Nakano,A., Hasegawa,K., Akimoto,C., Shibuya,N. and Minami,E.
Plant J. 2002  30(4)  447-455
EL5, a rice N-acetylchitooligosaccharide elicitor-responsive RING-H2 finger protein, is a ubiquitin ligase which functions in vitro in co-operation with an elicitor-responsive ubiquitin-conjugating enzyme, OsUBC5b.
Takai R, Hasegawa K, Kaku H, Shibuya N, Minami E.
Plant Sci. 2001  160(4)  577-583
Isolation and analysis of expression mechanisms of a rice gene, EL5, which shows structural similarity to ATL family from Arabidopsis, in response to N-acetylchitooligosaccharide elicitor.
TextPresso Search Search textpresso for EL5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein binding( GO:0005515 )
cell death( GO:0008219 )
zinc ion binding( GO:0008270 )
cytokinin mediated signaling( GO:0009736 )
integral to membrane( GO:0016021 )
ligase activity( GO:0016874 )
modification-dependent protein catabolic process( GO:0019941 )
response to nitrite( GO:0080033 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 7, 2015

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