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Basic Information
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CGSNL Gene Symbol
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FC1
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Gene Symbol Synonym
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OsCAD7, fc1, CAD7
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CGSNL Gene Name
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FLEXIBLE CULM 1
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Gene Name Synonym
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flexible culm1, FLEXIBLE CULM1, Protein FLEXIBLE CULM 1, Cinnamyl alcohol dehydrogenase 7
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Protein Name
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CINNAMYL-ALCOHOL DEHYDROGENASE 7
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Allele
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fc
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Chromosome No.
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4
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Explanation
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fc1 plants exhibited a reduction in mechanical strength and a slight delay in growth. Q0JA75. GO:0052747:sinapyl alcohol dehydrogenase activity. GO:1901698: response to nitrogen compound. PO:0030123: panicle inflorescence.
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Trait Class
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Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK102452
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MSU ID
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LOC_Os04g52280.1
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RAP ID
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Os04g0612700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Dong N.Q., Sun Y., Guo T., Shi C.L., Zhang Y.M., Kan Y., Xiang Y.H., Zhang H., Yang Y.B., Li Y.C., Zhao H.Y., Yu H.X., Lu Z.Q., Wang Y., Ye W.W., Shan J.X., Lin H.X.
Nat Commun 2020 11(1) 2629
UDP-glucosyltransferase regulates grain size and abiotic stress tolerance associated with metabolic flux redirection in rice.
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Bang S.W., Lee D.K., Jung H., Chung P.J., Kim Y.S., Choi Y.D., Suh J.W., Kim J.K.
Plant Biotechnol. J. 2018
Overexpression of OsTF1L, a rice HD-Zip transcription factor, promotes lignin biosynthesis and stomatal closure that improves drought tolerance.
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Park H.L., Kim T.L., Bhoo S.H., Lee T.H., Lee S.W., Cho M.H.
Molecules 2018 23(10)
Biochemical Characterization of the Rice Cinnamyl Alcohol Dehydrogenase Gene Family.
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Zhang W., Wu L., Ding Y., Yao X., Wu X., Weng F., Li G., Liu Z., Tang S., Ding C., Wang S.
J. Plant Res. 2017
Nitrogen fertilizer application affects lodging resistance by altering secondary cell wall synthesis in japonica rice (Oryza sativa).
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Lee D.K., Jung H., Jang G., Jeong J.S., Kim Y.S., Ha S.H., Do Choi Y., Kim J.K.
Plant Physiol. 2016 172(1) 575-88
Overexpression of the OsERF71 Transcription Factor Alters Rice Root Structure and Drought Resistance.
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Hirano K., Aya K., Kondo M., Okuno A., Morinaka Y., Matsuoka M.
Plant Cell Rep. 2012 31(1) 91-101
OsCAD2 is the major CAD gene responsible for monolignol biosynthesis in rice culm.
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Li X,Yang Y,Yao J,Chen G,Li X,Zhang Q,Wu C
Plant Mol. Biol. 2009 69 685-97
FLEXIBLE CULM 1 encoding a cinnamyl-alcohol dehydrogenase controls culm mechanical strength in rice.
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Tobias,C.M. and Chow,E.K.
Planta. 2005 220 (5) 678-688
Structure of the cinnamyl-alcohol dehydrogenase gene family in rice and promoter activity of a member associated with lignification
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TextPresso Search
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Search textpresso for FC1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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cinnamyl-alcohol dehydrogenase activity( GO:0045551 )
lignin metabolic process( GO:0009808 )
cell wall macromolecule metabolic process( GO:0044036 )
zinc ion binding( GO:0008270 )
lignin biosynthetic process( GO:0009809 )
nucleotide binding( GO:0000166 )
response to bacterium( GO:0009617 )
plant-type hypersensitive response( GO:0009626 )
apoplast( GO:0048046 )
aryl-alcohol dehydrogenase activity( GO:0018456 )
oxidation reduction( GO:0055114 )
secondary cell wall biogenesis( GO:0009834 )
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Trait Ontology
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lignin biosynthesis trait( TO:0000733 )
nitrogen sensitivity( TO:0000011 )
stem strength( TO:0000051 )
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Plant Ontology
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stem( PO:0009047 )
leaf sheath( PO:0020104 )
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Related Strains
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Phenotype images
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Last updated
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Aug 28, 2020
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