Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PROG1
Gene Symbol Synonym OsPROG1, ZOS7-02, OsZOS7-02
CGSNL Gene Name PROSTRATE GROWTH 1
Gene Name Synonym zinc-finger nuclear transcription factor PROG1, zinc-finger protein TFIIIA class of Oryza sativa 7-02, ZPT of Oryza sativa 7-02
Protein Name ZINC-FINGER PROTEIN TFIIIA CLASS OF ORYZA SATIVA 7-02
Allele prog1
Chromosome No. 7
Explanation EU554631(Oryza rufipogon), EU556720(Oryza rufipogon), EU556721(Oryza rufipogon), EU556722(Oryza nivara), EU556723(Oryza sativa), EU556719(Oryza rufipogon), EU556718(Oryza rufipogon), FJ155665(Oryza rufipogon). HM149562-HM237792 (O. sativa, O. rufipogon and O. nivara gene, promoter region). ZnF1 in O. rufipogon. MF503970, MF503971, MF503972 (O. rufipogon). ASR75314 (O. rufipogon). OsPROG1 and OgPROG7 are syntenic and orthologs (Shang et al. 2022). OnZnF1 (Oryza nivara zinc finger transcription factor 1) in rice plant architecture domestication (RPAD) locus.
Trait Class Vegetative organ - Culm
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os07g05900.1
RAP ID Os07g0153600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu Y., Yao F., Zou J., Guo D., Jiang W., Fan J., Li R., Yang Z., Ma Y., Deng H., Huang J., Tan L.
Plant Genome 2025  18(2)  e70032
RPAD locus controls prostrate growth habit in Oryza nivara.
Alam O., Purugganan M.D.
Plant Cell 2024   
Domestication and the evolution of crops: variable syndromes, complex genetic architectures, and ecological entanglements.
Shang L., Li X., He H., Yuan Q., Song Y., Wei Z., Lin H., Hu M., Zhao F., Zhang C., Li Y., Gao H., Wang T., Liu X., Zhang H., Zhang Y., Cao S., Yu X., Zhang B., Zhang Y., Tan Y., Qin M., Ai C., Yang Y., Zhang B., Hu Z., Wang H., Lv Y., Wang Y., Ma J., Wang Q., Lu H., Wu Z., Liu S., Sun Z., Zhang H., Guo L., Li Z., Zhou Y., Li J., Zhu Z., Xiong G., Ruan J., Qian Q.
Cell Res. 2022  32(10)  878-896
A super pan-genomic landscape of rice.
Wang W., Mauleon R., Hu Z., Chebotarov D., Tai S., Wu Z., Li M., Zheng T., Fuentes R.R., Zhang F., Mansueto L., Copetti D., Sanciangco M., Palis K.C., Xu J., Sun C., Fu B., Zhang H., Gao Y., Zhao X., Shen F., Cui X., Yu H., Li Z., Chen M., Detras J., Zhou Y., Zhang X., Zhao Y., Kudrna D., Wang C., Li R., Jia B., Lu J., He X., Dong Z., Xu J., Li Y., Wang M., Shi J., Li J., Zhang D., Lee S., Hu W., Poliakov A., Dubchak I., Ulat V.J., Borja F.N., Mendoza J.R., Ali J., Li J., Gao Q., Niu Y., Yue Z., Naredo M.E.B., Talag J., Wang X., Li J., Fang X., Yin Y., Glaszmann J.C., Zhang J., Li J., Hamilton R.S., Wing R.A., Ruan J., Zhang G., Wei C., Alexandrov N., McNally K.L., Li Z., Leung H.
Nature 2018  557(7703)  43-49
Genomic variation in 3,010 diverse accessions of Asian cultivated rice.
Wu Y., Zhao S., Li X., Zhang B., Jiang L., Tang Y., Zhao J., Ma X., Cai H., Sun C., Tan L.
Nat Commun 2018  9(1)  4157
Deletions linked to PROG1 gene participate in plant architecture domestication in Asian and African rice.
Li L.F., Li Y.L., Jia Y., Caicedo A.L., Olsen K.M.
Nat. Genet. 2017  49(5)  811-814
Signatures of adaptation in the weedy rice genome.
Civáň P., Brown T.A.
Genet. Resour. Crop Evol. 2017  64(6)  1125-1132
Origin of rice (Oryza sativa L.) domestication genes.
He J., Shao G., Wei X., Huang F., Sheng Z., Tang S., Hu P.
PLoS ONE 2017  12(5)  e0178177
Fine mapping and candidate gene analysis of qTAC8, a major quantitative trait locus controlling tiller angle in rice (Oryza sativa L.).
Jin,J., Huang,W., Gao,J.P., Yang,J., Shi,M., Zhu,M.Z., Luo,D. and Lin,H.X.
Nat Genet 2008  40(11)  1365-1369
Genetic control of rice plant architecture under domestication
Lin,H.-X., Jin,J., Huang,W., Gao,J.-P., Yang,J., Shi,M., Zhu,M.-Z. and Luo,D.
Nat Genet 2008  40(11)  1365-69
Genetic control of rice plant architecture domestication
Tan,L., Li,X., Liu,F., Sun,X., Li,C., Zhu,Z., Fu,Y., Cai,H., Wang,X., Xie,D. and Sun,C.
Nat Genet 2008  40(11)  1360-1364
Control of a key transition from prostrate to erect growth in rice domestication
Agarwal P., Arora R., Ray S., Ashok K Singh, Vijay P Singh, Takatsuji H., Kapoor S., Akhilesh K Tyagi
Plant Mol. Biol. 2007  65(4)  467-85
Genome-wide identification of C2H2 zinc-finger gene family in rice and their phylogeny and expression analysis.
DB Reference
Gramene ID GR:0080061
Ontologies
Gene Ontology nucleus( GO:0005634 )
homeostasis of number of cells within a tissue( GO:0048873 )
plastid( GO:0009536 )
transcription activator activity( GO:0016563 )
Trait Ontology primary branch number( TO:0000547 )
tiller angle( TO:0000567 )
grain number per plant( TO:0000440 )
secondary branch number( TO:0000557 )
plant height( TO:0000207 )
panicle number( TO:0000152 )
grain number( TO:0002759 )
grain yield per plant( TO:0000449 )
Plant Ontology basal axillary shoot system( PO:0005001 )
leaf sheath pulvinus( PO:0008017 )
leaf lamina base( PO:0008019 )
inflorescence branch( PO:0009081 )
Related Strains
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Phenotype images
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Last updated
Mar 20, 2026

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