Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PLDvarphi |
| Gene Symbol Synonym | OsPLDvarphi, spPLD, OsspPLD |
| CGSNL Gene Name | PHOSPHOLIPASE D varphi |
| Gene Name Synonym | |
| Protein Name | PHOSPHOLIPASE D varphi |
| Allele | |
| Chromosome No. | 6 |
| Explanation | a secretory PLD. GO:2000028: regulation of photoperiodism, flowering. PO:0030123: panicle inflorescence. |
| Trait Class |
Biochemical character
Reproductive organ - Heading date |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK122015
|
| MSU ID |
LOC_Os06g44060.1
LOC_Os06g44060.2 |
| RAP ID |
Os06g0649900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Qu L., Chu Y.J., Lin W.H., Xue H.W.
PLoS Genet. 2021 17(12) e1009905 A secretory Phospholipase D hydrolyzes phosphatidylcholine to suppress rice heading time.
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Li G, Lin F, Xue HW.
Cell Res 2007 17(10) 881-94. Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
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| TextPresso Search | Search textpresso for PLDvarphi ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
negative regulation of short-day photoperiodism, flowering( GO:0048577 )
negative regulation of long-day photoperiodism, flowering( GO:0048579 ) phosphatidylcholine catabolic process( GO:0034638 ) extracellular space( GO:0005615 ) photoperiodism, flowering( GO:0048573 ) phospholipase D activity( GO:0004630 ) |
| Trait Ontology |
days to heading( TO:0000137 )
flowering time( TO:0002616 ) |
| Plant Ontology |
root( PO:0009005 )
inflorescence( PO:0009049 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| May 30, 2022 | |
