Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PLDbeta2
Gene Symbol Synonym OsPLDbeta2, OsSTA86, OsC2DP27, C2DP27
CGSNL Gene Name PHOSPHOLIPASE D beta 2
Gene Name Synonym C2 Domain-Containing Protein 27
Protein Name PHOSPHOLIPASE D beta 2
Allele
Chromosome No. 3
Explanation AF411221. a mature anther-preferentially expressed gene.
Trait Class Biochemical character
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK069519
MSU ID LOC_Os03g02740.1
RAP ID Os03g0119100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022  23(4) 
Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
Ling S., Chen C., Wang Y., Sun X., Lu Z., Ouyang Y., Yao J.
BMC Genomics 2015  16  101
The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
Li G, Lin F, Xue HW.
Cell Res 2007  17(10)  881-94.
Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002  3(1)  2
Molecular diversity of phospholipase D in angiosperms.
TextPresso Search Search textpresso for PLDbeta2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology phospholipase D activity( GO:0004630 )
calcium ion binding( GO:0005509 )
phosphatidylinositol-4,5-bisphosphate binding( GO:0005546 )
defense response to bacterium, incompatible interaction( GO:0009816 )
membrane( GO:0016020 )
lipid catabolic process( GO:0016042 )
phosphatidylcholine metabolic process( GO:0046470 )
response to cadmium ion( GO:0046686 )
NAPE-specific phospholipase D activity( GO:0070290 )
Trait Ontology -
Plant Ontology anther( PO:0009066 )
Related Strains
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Phenotype images
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Last updated
Jun 20, 2022


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