Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HAK6
Gene Symbol Synonym OsHAK6, OsSTA42
CGSNL Gene Name HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 6
Gene Name Synonym High-affinity Potassium(K+) Transporter 6, Potassium transporter 6.
Protein Name HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 6
Allele
Chromosome No. 1
Explanation KT-HAK-KUP family of transporters. Q5JMH0. LOC_Os01g70660. a mature anther-preferentially expressed gene. The OsHAK6 ortholog in O. glaberrima did not show evidence of upregulation under salt stress. (Meyer et al. 2016)
Trait Class Biochemical character
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK107477
MSU ID LOC_Os01g70660.1
RAP ID Os01g0932500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Meyer R.S., Choi J.Y., Sanches M., Plessis A., Flowers J.M., Amas J., Dorph K., Barretto A., Gross B., Fuller D.Q., Bimpong I.K., Ndjiondjop M.N., Hazzouri K.M., Gregorio G.B., Purugganan M.D.
Nat. Genet. 2016  48(9)  1083-8
Domestication history and geographical adaptation inferred from a SNP map of African rice.
Ling S., Chen C., Wang Y., Sun X., Lu Z., Ouyang Y., Yao J.
BMC Genomics 2015  16  101
The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
Horie T., Sugawara M., Okada T., Taira K., Kaothien-Nakayama P., Katsuhara M., Shinmyo A., Nakayama H.
J. Biosci. Bioeng. 2011  111(3)  346-56
Rice sodium-insensitive potassium transporter, OsHAK5, confers increased salt tolerance in tobacco BY2 cells.
Yang Z,Gao Q,Sun C,Li W,Gu S,Xu C
J Genet Genomics 2009  36  161-72
Molecular evolution and functional divergence of HAK potassium transporter gene family in rice (Oryza sativa L.).
Okada T., Nakayama H., Shinmyo A., Yoshida K.
Plant Biotechnology 2008  25(3)  241-245
Expression of OsHAK genes encoding potassium ion transporters in rice
R. Naga Amrutha, P. Nataraj Sekhar, Rajeev K. Varshney and P.B. Kavi Kishor
Plant Sci. 2007  172(4)  708-721
Genome-wide analysis and identification of genes related to potassium transporter families in rice (Oryza sativa L.)
Banuelos,M.A., Garciadeblas,B., Cubero,B. and Rodriguez-Navarro,A.
Plant Physiol. 2002  130(2)  784-795
Inventory and functional characterization of the HAK potassium transporters of rice.
TextPresso Search Search textpresso for HAK6 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology potassium ion transmembrane transporter activity( GO:0015079 )
potassium ion transport( GO:0006813 )
integral to membrane( GO:0016021 )
potassium ion binding( GO:0030955 )
Trait Ontology -
Plant Ontology anther( PO:0009066 )
Related Strains
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Phenotype images
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Last updated
Sep 14, 2016


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