Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol LCS
Gene Symbol Synonym OsHAK1, HAK1
Gene Name Synonym High-affinity Potassium(K+) Transporter 1, Potassium transporter 1, low Cs accumulation
Allele lcs, lcs-1, lcs-2, lcs-3
Chromosome No. 4
Explanation AJ427970, AY324878. KT-HAK-KUP family of transporters. Q6VVA6.
Trait Class Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK101722
MSU ID LOC_Os04g32920.1
RAP ID Os04g0401700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Gao Q., Yin X., Wang F., Hu S., Liu W., Chen L., Dai X., Liang M.
Int J Mol Sci 2023  24(8) 
<i>OsJRL40</i>, a Jacalin-Related Lectin Gene, Promotes Salt Stress Tolerance in Rice.
Du F., Wang Y., Wang J., Li Y., Zhang Y., Zhao X., Xu J., Li Z., Zhao T., Wang W., Fu B.
J Integr Plant Biol 2023   
The basic helix-loop-helix transcription factor gene, OsbHLH38, plays a key role in controlling rice salt tolerance.
Jing X., Song X., Cai S., Wang P., Lu G., Yu L., Zhang C., Wu Z.
Mol. Plant Pathol. 2022  23(8)  1107-1121
Overexpression of OsHAK5 potassium transporter enhances virus resistance in rice (Oryza sativa).
Ye S., Huang Z., Zhao G., Zhai R., Ye J., Wu M., Yu F., Zhu G., Zhang X.
Plants (Basel) 2021  10(11) 
Differential Physiological Responses to Salt Stress between Salt-Sensitive and Salt-Tolerant <i>japonica</i> Rice Cultivars at the Post-Germination and Seedling Stages.
Ishikawa S., Hayashi S., Abe T., Igura M., Kuramata M., Tanikawa H., Iino M., Saito T., Ono Y., Ishikawa T., Fujimura S., Goto A., Takagi H.
Sci Rep 2017  7(1)  2432
Low-cesium rice: mutation in OsSOS2 reduces radiocesium in rice grains.
Rai H., Yokoyama S., Satoh-Nagasawa N., Furukawa J., Nomi T., Ito Y., Fujimura S., Takahashi H., Suzuki R., Yousra E., Goto A., Fuji S., Nakamura S.I., Shinano T., Nagasawa N., Wabiko H., Hattori H.
Plant Cell Physiol. 2017  58(9)  1486-1493
Cesium Uptake by Rice Roots Largely Depends Upon a Single Gene, HAK1, Which Encodes a Potassium Transporter.
Liu L., Zheng C., Kuang B., Wei L., Yan L., Wang T.
PLoS Genet. 2016  12(7)  e1006085
receptor-like kinase RUPO Interacts with Potassium Transporters to Regulate pollen Tube Growth and Integrity in Rice.
Wang H., Wu Z., Han J., Zheng W., Yang C.
PLoS ONE 2012  7(5)  e37817
Comparison of ion balance and nitrogen metabolism in old and young leaves of alkali-stressed rice plants.
Cai J., Chen L., Qu H., Lian J., Liu W., Hu Y., Xu G.
Acta Physiologiae Plantarum 2012  34  939-946
Alteration of nutrient allocation and transporter genes expression in rice under N, P, K, and Mg deficiencies
Horie T., Sugawara M., Okada T., Taira K., Kaothien-Nakayama P., Katsuhara M., Shinmyo A., Nakayama H.
J. Biosci. Bioeng. 2011  111(3)  346-56
Rice sodium-insensitive potassium transporter, OsHAK5, confers increased salt tolerance in tobacco BY2 cells.
Ahmadi N., Negrão S., Katsantonis D., Frouin J., Ploux J., Letourmy P., Droc G., Babo P., Trindade H., Bruschi G., Greco R., Oliveira M.M., Piffanelli P., Courtois B.
Theor. Appl. Genet. 2011  123(6)  881-95
Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.
Yang Z,Gao Q,Sun C,Li W,Gu S,Xu C
J Genet Genomics 2009  36  161-72
Molecular evolution and functional divergence of HAK potassium transporter gene family in rice (Oryza sativa L.).
Okada T., Nakayama H., Shinmyo A., Yoshida K.
Plant Biotechnology 2008  25(3)  241-245
Expression of OsHAK genes encoding potassium ion transporters in rice
R. Naga Amrutha, P. Nataraj Sekhar, Rajeev K. Varshney and P.B. Kavi Kishor
Plant Sci. 2007  172(4)  708-721
Genome-wide analysis and identification of genes related to potassium transporter families in rice (Oryza sativa L.)
Banuelos,M.A., Garciadeblas,B., Cubero,B. and Rodriguez-Navarro,A.
Plant Physiol. 2002  130(2)  784-795
Inventory and functional characterization of the HAK potassium transporters of rice.
TextPresso Search Search textpresso for LCS ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology potassium ion homeostasis( GO:0055075 )
defense response to virus( GO:0051607 )
response to salt stress( GO:0009651 )
plasma membrane( GO:0005886 )
potassium ion transport( GO:0006813 )
potassium:sodium symporter activity( GO:0009674 )
potassium ion transmembrane transporter activity( GO:0015079 )
cellular response to potassium ion starvation( GO:0051365 )
integral to membrane( GO:0016021 )
potassium ion binding( GO:0030955 )
Trait Ontology plant height( TO:0000207 )
salt tolerance( TO:0006001 )
rice grassy stunt 1 and 2 virus resistance( TO:0000213 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Oct 12, 2023