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Basic Information
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CGSNL Gene Symbol
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LIC
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Gene Symbol Synonym
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OsC3H46, C3H46, OsLIC, OsFLA6, FLA6
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CGSNL Gene Name
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LEAF AND TILLER ANGLE INCREASED CONTROLLER
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Gene Name Synonym
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Zinc finger CCCH domain-containing protein 46, LEAF and TILLER ANGLE INCREASED CONTROLLER, Flag leaf angle 6
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Protein Name
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ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 46
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Allele
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lic, lic-1, lic-2, OsFLA6GG, OsFLA6AA
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Chromosome No.
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6
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Explanation
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Q5Z807. OsLIC is a negative regulator of the BR response. OsLIC is epistatic to d2-1, while d61-1 is epistatic to OsLIC. GO:1900458: negative regulation of brassinosteroid mediated signaling pathway. TO:0000975: grain width.
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Trait Class
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Vegetative organ - Leaf
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK107008
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MSU ID
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LOC_Os06g49080.1
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RAP ID
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Os06g0704300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Duan E., Lin Q., Wang Y., Ren Y., Xu H., Zhang Y., Wang Y., Teng X., Dong H., Wang Y., Jiang X., Chen X., Lei J., Yang H., Chen R., Jiang L., Wang H., Wan J.
Plant Cell 2023
The transcriptional hub SHORT INTERNODES1 integrates hormone signals to orchestrate rice growth and development.
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Jiang J., Zhang Y., Li Y., Hu C., Xu L., Zhang Y., Wang D., Hong D., Dang X.
Front Plant Sci 2022 13 906912
An Analysis of Natural Variation Reveals That <i>OsFLA2</i> Controls Flag leaf angle in Rice (<i>Oryza sativa</i> L.).
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Zhu C.L., Xing B., Teng S.Z., Deng C., Shen Z.Y., Ai P.F., Lu T.G., Zhang S.W., Zhang Z.G.
Front Plant Sci 2021 12 760041
OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice.
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Ke Y., Yuan M., Liu H., Hui S., Qin X., Chen J., Zhang Q., Li X., Xiao J., Zhang Q., Wang S.
Proc. Natl. Acad. Sci. U.S.A. 2020 117(7) 3867-3873
The versatile functions of OsALDH2B1 provide a genic basis for growth-defense trade-offs in rice.
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Tang Y., Liu H., Guo S., Wang B., Li Z., Chong K., Xu Y.
Plant Physiol. 2018 176(1) 946-959
OsmiR396d Affects Gibberellin and Brassinosteroid Signaling to Regulate Plant Architecture in Rice.
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Yang C., Ma Y., He Y., Tian Z., Li J.
Plant J. 2018 93(3) 489-501
OsOFP19 modulates plant architecture by integrating the cell division pattern and brassinosteroid signaling.
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Liu S., Hua L., Dong S., Chen H., Zhu X., Jiang J., Zhang F., Li Y., Fang X., Chen F.
Plant J. 2015
OsMAPK6, a mitogen-activated protein kinase, influences rice grain size and biomass production.
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Zhang C., Bai M.Y., Chong K.
Plant Cell Rep. 2014 33(5) 683-96
Brassinosteroid-mediated regulation of agronomic traits in rice.
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Zhang C., Xu Y., Guo S., Zhu J., Huan Q., Liu H., Wang L., Luo G., Wang X., Chong K.
PLoS Genet. 2012 8(4) e1002686
Dynamics of brassinosteroid response modulated by negative regulator LIC in rice.
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Jiang,Y., Bao,L., Jeong,S.Y., Kim,S.K., Xu,C., Li,X. and Zhang,Q.
Plant J. 2011
XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassinosteroids and cell cycling in rice
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Wang L,Xu Y,Zhang C,Ma Q,Joo SH,Kim SK,Xu Z,Chong K
PLoS One 2008 3 e3521
OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling.
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Wang D,Guo Y,Wu C,Yang G,Li Y,Zheng C
BMC Genomics. 2008 9 44
Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to brassinosteroid stimulus( GO:0009741 )
DNA binding( GO:0003677 )
mitochondrion( GO:0005739 )
zinc ion binding( GO:0008270 )
brassinosteroid mediated signaling( GO:0009742 )
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Trait Ontology
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brassinosteroid sensitivity( TO:0002677 )
leaf angle( TO:0000206 )
tiller angle( TO:0000567 )
plant height( TO:0000207 )
seed number( TO:0000445 )
leaf lamina joint bending( TO:0002688 )
flag leaf angle( TO:0000124 )
grain width( TO:0000402 )
grain size( TO:0000397 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Feb 20, 2025
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