Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol LIC
Gene Symbol Synonym OsC3H46, C3H46, OsLIC, OsFLA6, FLA6
Gene Name Synonym Zinc finger CCCH domain-containing protein 46, LEAF and TILLER ANGLE INCREASED CONTROLLER, Flag leaf angle 6
Allele lic-1, lic-2, OsFLA6GG, OsFLA6AA
Chromosome No. 6
Explanation Q5Z807. OsLIC is a negative regulator of the BR response. OsLIC is epistatic to d2-1, while d61-1 is epistatic to OsLIC. GO:1900458: negative regulation of brassinosteroid mediated signaling pathway.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Character as QTL - Yield and productivity
cDNA Accession No. AK107008
MSU ID LOC_Os06g49080.1
RAP ID Os06g0704300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Jiang J., Zhang Y., Li Y., Hu C., Xu L., Zhang Y., Wang D., Hong D., Dang X.
Front Plant Sci 2022  13  906912
An Analysis of Natural Variation Reveals That <i>OsFLA2</i> Controls Flag leaf angle in Rice (<i>Oryza sativa</i> L.).
Zhu C.L., Xing B., Teng S.Z., Deng C., Shen Z.Y., Ai P.F., Lu T.G., Zhang S.W., Zhang Z.G.
Front Plant Sci 2021  12  760041
OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice.
Ke Y., Yuan M., Liu H., Hui S., Qin X., Chen J., Zhang Q., Li X., Xiao J., Zhang Q., Wang S.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(7)  3867-3873
The versatile functions of OsALDH2B1 provide a genic basis for growth-defense trade-offs in rice.
Tang Y., Liu H., Guo S., Wang B., Li Z., Chong K., Xu Y.
Plant Physiol. 2018  176(1)  946-959
OsmiR396d Affects Gibberellin and Brassinosteroid Signaling to Regulate Plant Architecture in Rice.
Yang C., Ma Y., He Y., Tian Z., Li J.
Plant J. 2018  93(3)  489-501
OsOFP19 modulates plant architecture by integrating the cell division pattern and brassinosteroid signaling.
Liu S., Hua L., Dong S., Chen H., Zhu X., Jiang J., Zhang F., Li Y., Fang X., Chen F.
Plant J. 2015   
OsMAPK6, a mitogen-activated protein kinase, influences rice grain size and biomass production.
Zhang C., Bai M.Y., Chong K.
Plant Cell Rep. 2014  33(5)  683-96
Brassinosteroid-mediated regulation of agronomic traits in rice.
Zhang C., Xu Y., Guo S., Zhu J., Huan Q., Liu H., Wang L., Luo G., Wang X., Chong K.
PLoS Genet. 2012  8(4)  e1002686
Dynamics of brassinosteroid response modulated by negative regulator LIC in rice.
Jiang,Y., Bao,L., Jeong,S.Y., Kim,S.K., Xu,C., Li,X. and Zhang,Q.
Plant J. 2011   
XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassinosteroids and cell cycling in rice
Wang L,Xu Y,Zhang C,Ma Q,Joo SH,Kim SK,Xu Z,Chong K
PLoS One 2008  3  e3521
OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling.
Wang D,Guo Y,Wu C,Yang G,Li Y,Zheng C
BMC Genomics. 2008  9  44
Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.
TextPresso Search Search textpresso for LIC ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology DNA binding( GO:0003677 )
mitochondrion( GO:0005739 )
zinc ion binding( GO:0008270 )
brassinosteroid mediated signaling( GO:0009742 )
Trait Ontology brassinosteroid sensitivity( TO:0002677 )
leaf angle( TO:0000206 )
tiller angle( TO:0000567 )
plant height( TO:0000207 )
seed number( TO:0000445 )
leaf lamina joint bending( TO:0002688 )
flag leaf angle( TO:0000124 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Oct 13, 2022