Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | C3H45 |
| Gene Symbol Synonym | OsC3H45, OsCPSF30-L4, CPSF30-L4, OsC3H50, C3H50, OsYTHDC1A, YTHDC1A |
| CGSNL Gene Name | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 |
| Gene Name Synonym | Zinc finger CCCH domain-containing protein 45, 30 kDa subunit of cleavage and polyadenylation specificity factor longer isoform 4, CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30 longer isoform 4, CCCH Zinc Finger Family Gene 50, YTH domain-containing protein 1A |
| Protein Name | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 |
| Allele | |
| Chromosome No. | 6 |
| Explanation | Q0DA50. N6-methyladenosine (m6A) methylation regulatory gene, reader (YTH (YT521-B homology) domain) protein. OsC3H50 in Wang et al. 2025. GO:1990247: N6-methyladenosine-containing RNA reader activity. |
| Trait Class |
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os06g46400.1
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| RAP ID |
Os06g0677700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Wang Z., Li S., Wu H., Huang L., Fu L., Zhan C., Lu X., Yang L., Dai L., Zeng D.
Genes (Basel) 2025 16(4) Identification and Expression Analysis of CCCH Zinc Finger Family Genes in <i>Oryza sativa</i>.
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Hasan M., Nishat Z.S., Hasan M.S., Hossain T., Ghosh A.
Biochem Biophys Rep 2024 38 101677 Identification of m6A RNA methylation genes in <i>Oryza sativa</i> and expression profiling in response to different developmental and environmental stimuli.
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Ma W., Cui S., Lu Z., Yan X., Cai L., Lu Y., Cai K., Zhou H., Ma R., Zhou S., Wang X.
Plants (Basel) 2022 11(17) YTH Domain Proteins Play an Essential Role in Rice Growth and Stress Response.
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Wang D,Guo Y,Wu C,Yang G,Li Y,Zheng C
BMC Genomics. 2008 9 44 Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
defense response to bacterium( GO:0042742 )
defense response to fungus( GO:0050832 ) response to cold( GO:0009409 ) response to salt stress( GO:0009651 ) response to water deprivation( GO:0009414 ) response to desiccation( GO:0009269 ) response to wounding( GO:0009611 ) nucleoplasm( GO:0005654 ) metal ion binding( GO:0046872 ) mRNA binding( GO:0003729 ) nuclear mRNA splicing, via spliceosome( GO:0000398 ) regulation of nuclear mRNA splicing, via spliceosome( GO:0048024 ) DNA binding( GO:0003677 ) zinc ion binding( GO:0008270 ) |
| Trait Ontology |
bacterial blight disease resistance( TO:0000175 )
blast disease( TO:0000074 ) fungal disease resistance( TO:0000439 ) bacterial disease resistance( TO:0000315 ) cold tolerance( TO:0000303 ) salt tolerance( TO:0006001 ) drought tolerance( TO:0000276 ) seed set percent( TO:0000455 ) 1000-seed weight( TO:0000382 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Oct 15, 2025 | |
