Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | C3H4 |
| Gene Symbol Synonym | OsC3H4, OsCPSF30-L1, CPSF30-L1 |
| CGSNL Gene Name | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 4 |
| Gene Name Synonym | Zinc finger CCCH domain-containing protein 4, 30 kDa subunit of cleavage and polyadenylation specificity factor longer isoform 1, CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30 longer isoform 1 |
| Protein Name | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 4 |
| Allele | |
| Chromosome No. | 1 |
| Explanation | EC=3.6.1.- Q1EHT7. N6-methyladenosine (m6A) methylation regulatory gene, reader (YTH (YT521-B homology) domain) protein. |
| Trait Class |
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK100311
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| MSU ID |
LOC_Os01g15300.1
LOC_Os01g15300.2 |
| RAP ID |
Os01g0256800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Hasan M., Nishat Z.S., Hasan M.S., Hossain T., Ghosh A.
Biochem Biophys Rep 2024 38 101677 Identification of m6A RNA methylation genes in <i>Oryza sativa</i> and expression profiling in response to different developmental and environmental stimuli.
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Wang D,Guo Y,Wu C,Yang G,Li Y,Zheng C
BMC Genomics. 2008 9 44 Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.
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| TextPresso Search | Search textpresso for C3H4 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)( GO:0000462 )
RNA binding( GO:0003723 ) mRNA binding( GO:0003729 ) metal ion binding( GO:0046872 ) helicase activity( GO:0004386 ) ATPase activity( GO:0016887 ) nucleolus( GO:0005730 ) response to wounding( GO:0009611 ) response to desiccation( GO:0009269 ) response to water deprivation( GO:0009414 ) response to salt stress( GO:0009651 ) response to cold( GO:0009409 ) defense response to fungus( GO:0050832 ) defense response to bacterium( GO:0042742 ) ATP binding( GO:0005524 ) ATP-dependent helicase activity( GO:0008026 ) DNA binding( GO:0003677 ) zinc ion binding( GO:0008270 ) |
| Trait Ontology |
bacterial blight disease resistance( TO:0000175 )
blast disease( TO:0000074 ) fungal disease resistance( TO:0000439 ) bacterial disease resistance( TO:0000315 ) cold tolerance( TO:0000303 ) salt tolerance( TO:0006001 ) drought tolerance( TO:0000276 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Sep 4, 2024 | |
