Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol C3H33
Gene Symbol Synonym OsC3H33, OsTZF5, TZF5, OsCCCH-Zn-5, CCCH-Zn-5
CGSNL Gene Name ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33
Gene Name Synonym Zinc finger CCCH domain-containing protein 33, Tandem zinc finger protein 5
Protein Name ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33
Allele
Chromosome No. 5
Explanation Q688R3. GO:0099568: cytoplasmic region. PO:0030123: panicle inflorescence.
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK105767
MSU ID LOC_Os05g03760.1
RAP ID Os05g0128200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Mohanty B.
Front Genet 2021  12  639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
Selvaraj M.G., Jan A., Ishizaki T., Valencia M., Dedicova B., Maruyama K., Ogata T., Todaka D., Yamaguchi-Shinozaki K., Nakashima K., Ishitani M.
Plant Biotechnol. J. 2020   
Expression of the CCCH-tandem zinc finger protein gene OsTZF5 under a stress-inducible promoter mitigates the effect of drought stress on rice grain yield under field conditions.
Pandey D.M., Kim S.R.
Journal of Plant Biology 2012  55  489-497
Identification and expression analysis of hypoxia stress inducible CCCH-type zinc finger protein genes in rice
Marcelo C Pomeranz, Hah C., Pei-Chi Lin, Shin Gene Kang, John J Finer, Perry J Blackshear, Jyan-Chyun Jang
Plant Physiol. 2010  152(1)  151-65
The Arabidopsis tandem zinc finger protein AtTZF1 traffics between the nucleus and cytoplasmic foci and binds both DNA and RNA.
Wang D,Guo Y,Wu C,Yang G,Li Y,Zheng C
BMC Genomics. 2008  9  44
Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.
TextPresso Search Search textpresso for C3H33 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to salt stress( GO:0009651 )
cytoplasm( GO:0005737 )
response to cold( GO:0009409 )
response to abscisic acid stimulus( GO:0009737 )
response to water deprivation( GO:0009414 )
response to deep water( GO:0030912 )
DNA binding( GO:0003677 )
zinc ion binding( GO:0008270 )
Trait Ontology submergence tolerance( TO:0000524 )
drought tolerance( TO:0000276 )
abscisic acid sensitivity( TO:0000615 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
growth and development trait( TO:0000357 )
relative chlorophyll content( TO:0001016 )
relative water content( TO:0000136 )
grain yield( TO:0000396 )
Plant Ontology leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
Related Strains
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Phenotype images
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Last updated
Nov 16, 2021


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