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Basic Information
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CGSNL Gene Symbol
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HSFC2A
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Gene Symbol Synonym
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HSfC2a, OsHsfC2a, OsHsf-05, HSF05, OsHSF5, HSF5
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CGSNL Gene Name
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HEAT STRESS TRANSCRIPTION FACTOR C2A
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Gene Name Synonym
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Heat stress transcription factor C2a, Heat stress transcription factor C-2a, Heat stress transcription factor 5
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Protein Name
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HEAT STRESS TRANSCRIPTION FACTOR C2a
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Allele
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Chromosome No.
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2
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Explanation
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AP004070. Q6EUG4. OsHSF5 in Muthuramalingam et al. 2019.
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Trait Class
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Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK106488
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MSU ID
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LOC_Os02g13800.1
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RAP ID
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Os02g0232000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Mohanty B.
Front Genet 2021 12 639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019
Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
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Lavania D., Dhingra A., Grover A.
Planta 2018 247(6) 1267-1276
Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
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Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011 278(17) 3076-85
Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
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Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011 286(2) 171-87
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
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Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009 10 291-300
Identification and expression analysis of OsHsfs in rice.
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TextPresso Search
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Search textpresso for HSFC2A
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to deep water( GO:0030912 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to stress( GO:0006950 )
sequence-specific DNA binding( GO:0043565 )
response to abiotic stimulus( GO:0009628 )
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Trait Ontology
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abiotic stress trait( TO:0000168 )
submergence tolerance( TO:0000524 )
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Plant Ontology
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leaf sheath( PO:0020104 )
leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
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Related Strains
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Phenotype images
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Last updated
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Jul 8, 2021
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