Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HSFC1B
Gene Symbol Synonym OsHsfC1b, HsfC1b, HSF03, OsHsf-03, OsHSF3, HSF3, HSF11, rHsf11
CGSNL Gene Name HEAT STRESS TRANSCRIPTION FACTOR C1b
Gene Name Synonym Heat stress transcription factor C1b, Heat stress transcription factor C-1b, Heat stress transcription factor 3
Protein Name HEAT STRESS TRANSCRIPTION FACTOR C1b
Allele hsfc1b
Chromosome No. 1
Explanation AP003309. Q942D6. OsHSF3 in Muthuramalingam et al. 2019.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK066316
MSU ID LOC_Os01g53220.1
RAP ID Os01g0733200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019   
Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
Lavania D., Dhingra A., Grover A.
Planta 2018  247(6)  1267-1276
Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
Suzuki K., Aoki N., Matsumura H., Okamura M., Ohsugi R., Shimono H.
Plant Cell Environ. 2014   
Cooling water before panicle initiation increases chilling-induced male sterility and disables chilling-induced expression of genes encoding OsFKBP65 and heat shock proteins in rice spikelets.
Schmidt R., Schippers J.H., Welker A., Mieulet D., Guiderdoni E., Mueller-Roeber B.
AoB Plants 2012  2012  pls011
Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp. japonica.
Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011  286(2)  171-87
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011  278(17)  3076-85
Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009  10  291-300
Identification and expression analysis of OsHsfs in rice.
TextPresso Search Search textpresso for HSFC1B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to stress( GO:0006950 )
sequence-specific DNA binding( GO:0043565 )
response to abiotic stimulus( GO:0009628 )
Trait Ontology abiotic stress trait( TO:0000168 )
Plant Ontology leaf sheath( PO:0020104 )
leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Feb 18, 2020


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