Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HSFB2C
Gene Symbol Synonym HSfB2c, OsHsfB2c, OsHsf-24, HSF24, OsHSF24
CGSNL Gene Name HEAT STRESS TRANSCRIPTION FACTOR B2C
Gene Name Synonym Heat stress transcription factor B2c, Heat stress transcription factor B-2c, Heat stress transcription factor 24
Protein Name HEAT STRESS TRANSCRIPTION FACTOR B2c
Allele
Chromosome No. 9
Explanation AP005681. Q652B0. OsHSF24 in Muthuramalingam et al. 2019.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK106525
AK106545
AK105409
MSU ID LOC_Os09g35790.1
LOC_Os09g35790.2
LOC_Os09g35790.3
RAP ID Os09g0526600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Mohanty B.
Front Genet 2021  12  639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
Liu A., Zhou Z., Yi Y., Chen G.
BMC Genomics 2020  21(1)  127
Transcriptome analysis reveals the roles of stem nodes in cadmium transport to rice grain.
Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019   
Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
Lavania D., Dhingra A., Grover A.
Planta 2018  247(6)  1267-1276
Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
Yoo Y.H., Nalini Chandran AK., Park J.C., Gho Y.S., Lee S.W., An G., Jung K.H.
Front Plant Sci 2017  8  580
OsPhyB-Mediating Novel Regulatory Pathway for drought tolerance in Rice Root Identified by a Global RNA-Seq Transcriptome Analysis of Rice Genes in Response to Water Deficiencies.
Khanday I., Das S., Chongloi G.L., Bansal M., Grossniklaus U., Vijayraghavan U.
Plant Physiol. 2016  172(1)  372-88
Genome-Wide Targets Regulated by the OsMADS1 Transcription Factor Reveals Its DNA Recognition Properties.
Suzuki K., Aoki N., Matsumura H., Okamura M., Ohsugi R., Shimono H.
Plant Cell Environ. 2014   
Cooling water before panicle initiation increases chilling-induced male sterility and disables chilling-induced expression of genes encoding OsFKBP65 and heat shock proteins in rice spikelets.
Rerksiri W., Zhang X., Xiong H., Chen X.
ScientificWorldJournal 2013  2013  397401
Expression and promoter analysis of six heat stress-inducible genes in rice.
Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011  286(2)  171-87
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011  278(17)  3076-85
Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009  10  291-300
Identification and expression analysis of OsHsfs in rice.
Yamaguchi, Takeshi
Plant Physiol. 2007  144(1)  258-277
Comprehensive Expression Profiling of Rice Grain Filling-Related Genes under High Temperature Using DNA Microarray.
TextPresso Search Search textpresso for HSFB2C ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to heat( GO:0009408 )
response to deep water( GO:0030912 )
response to cadmium ion( GO:0046686 )
response to abiotic stimulus( GO:0009628 )
response to stress( GO:0006950 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
transcription factor activity( GO:0003700 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology heat tolerance( TO:0000259 )
abiotic stress trait( TO:0000168 )
submergence tolerance( TO:0000524 )
Plant Ontology leaf sheath( PO:0020104 )
leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Jul 5, 2022


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