Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HSFB1
Gene Symbol Synonym HSfB1, OsHsfB1, OsHsf-23, HSF23, OsHsf23, OsHSF23, TBF1
CGSNL Gene Name HEAT STRESS TRANSCRIPTION FACTOR B1
Gene Name Synonym Heat stress transcription factor B1, Heat stress transcription factor B-1, Heat stress transcription factor 23
Protein Name HEAT STRESS TRANSCRIPTION FACTOR B1
Allele
Chromosome No. 9
Explanation AP006057. Q67TP9. HQ858829. HSF-BDB transcription factor. OsHSF23 in Muthuramalingam et al. 2019.
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK101182
MSU ID LOC_Os09g28354.1
RAP ID Os09g0456800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Mohanty B.
Front Genet 2021  12  639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019   
Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
Lavania D., Dhingra A., Grover A.
Planta 2018  247(6)  1267-1276
Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
Xu G., Yuan M., Ai C., Liu L., Zhuang E., Karapetyan S., Wang S., Dong X.
Nature 2017  545(7655)  491-494
uORF-mediated translation allows engineered plant disease resistance without fitness costs.
Tanabe S., Onodera H., Hara N., Ishii-Minami N., Day B., Fujisawa Y., Hagio T., Toki S., Shibuya N., Nishizawa Y., Minami E.
Biosci. Biotechnol. Biochem. 2015    1-7
The elicitor-responsive gene for a GRAS family protein, CIGR2, suppresses cell death in rice inoculated with rice blast fungus via activation of a heat shock transcription factor, OsHsf23.
Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011  286(2)  171-87
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011  278(17)  3076-85
Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009  10  291-300
Identification and expression analysis of OsHsfs in rice.
Yilmaz,A., Nishiyama,M.Y. Jr., Fuentes,B.G., Souza,G.M., Janies,D., Gray,J. and Grotewold,E.
Plant Physiol. 2009  149(1)  171-180
GRASSIUS: a platform for comparative regulatory genomics across the grasses
TextPresso Search Search textpresso for HSFB1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to deep water( GO:0030912 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
transcription factor activity( GO:0003700 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to stress( GO:0006950 )
positive regulation of plant-type hypersensitive response( GO:0034052 )
defense response, incompatible interaction( GO:0009814 )
defense response to fungus, incompatible interaction( GO:0009817 )
sequence-specific DNA binding( GO:0043565 )
response to abiotic stimulus( GO:0009628 )
cytosol( GO:0005829 )
Trait Ontology abiotic stress trait( TO:0000168 )
submergence tolerance( TO:0000524 )
Plant Ontology leaf sheath( PO:0020104 )
leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Jul 8, 2021


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