Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HSFA2B
Gene Symbol Synonym HSfA2b, OsHsfA2b, OsHsf-18, rHsf5, HS1, HSF18, OsHSF18, HSF5, OsHSF5
CGSNL Gene Name HEAT STRESS TRANSCRIPTION FACTOR A2B
Gene Name Synonym Heat stress transcription factor A2b, Heat stress transcription factor A-2b, Heat stress transcription factor 18, Heat stress transcription factor 5
Protein Name HEAT STRESS TRANSCRIPTION FACTOR A2b
Allele
Chromosome No. 7
Explanation AP003826. Q6VBB2. AY344487. OsHSF18 in Muthuramalingam et al. 2019.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK101824
MSU ID LOC_Os07g08140.1
RAP ID Os07g0178600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019   
Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
Lavania D., Dhingra A., Grover A.
Planta 2018  247(6)  1267-1276
Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011  278(17)  3076-85
Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011  286(2)  171-87
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009  10  291-300
Identification and expression analysis of OsHsfs in rice.
Liu JG,Qin QL,Zhang Z,Peng RH,Xiong AS,Chen JM,Yao QH
BMB Rep 2009  42  16-21
OsHSF7 gene in rice, Oryza sativa L., encodes a transcription factor that functions as a high temperature receptive and responsive factor.
TextPresso Search Search textpresso for HSFA2B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology cytoplasm( GO:0005737 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to stress( GO:0006950 )
sequence-specific DNA binding( GO:0043565 )
cytosol( GO:0005829 )
response to abiotic stimulus( GO:0009628 )
Trait Ontology abiotic stress trait( TO:0000168 )
Plant Ontology leaf sheath( PO:0020104 )
leaf( PO:0025034 )
root( PO:0009005 )
inflorescence( PO:0009049 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Feb 18, 2020


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