Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
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| CGSNL Gene Symbol | HSFA1 |
| Gene Symbol Synonym | OsHsfA1, HSFA1, OsHSF13, HSF13, OsHsf-13, HSF3, rHsf3, OsHsfA1a |
| CGSNL Gene Name | HEAT STRESS TRANSCRIPTION FACTOR A1 |
| Gene Name Synonym | Heat stress transcription factor A1, Heat stress transcription factor A-1, Heat stress transcription factor 13, Heat stress transcription factor 3 |
| Protein Name | HEAT STRESS TRANSCRIPTION FACTOR A1 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | AC120506. Q84T61. OsHSF13 in Muthuramalingam et al. 2019. |
| Trait Class |
Tolerance and resistance - Stress tolerance
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK106118
AK100430 |
| MSU ID |
LOC_Os03g63750.1
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| RAP ID |
Os03g0854500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019 Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
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Lavania D., Dhingra A., Grover A.
Planta 2018 247(6) 1267-1276 Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
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Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011 278(17) 3076-85 Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
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Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011 286(2) 171-87 Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
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Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009 10 291-300 Identification and expression analysis of OsHsfs in rice.
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| TextPresso Search | Search textpresso for HSFA1 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 ) transcription( GO:0006350 ) regulation of transcription, DNA-dependent( GO:0006355 ) response to stress( GO:0006950 ) sequence-specific DNA binding( GO:0043565 ) cytoplasmic membrane-bounded vesicle( GO:0016023 ) |
| Trait Ontology | - |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Feb 18, 2020 | |
