Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HSFA1
Gene Symbol Synonym OsHsfA1, HSFA1, OsHSF13, HSF13, OsHsf-13, HSF3, rHsf3, OsHsfA1a
CGSNL Gene Name HEAT STRESS TRANSCRIPTION FACTOR A1
Gene Name Synonym Heat stress transcription factor A1, Heat stress transcription factor A-1, Heat stress transcription factor 13, Heat stress transcription factor 3
Protein Name HEAT STRESS TRANSCRIPTION FACTOR A1
Allele
Chromosome No. 3
Explanation AC120506. Q84T61. OsHSF13 in Muthuramalingam et al. 2019.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK106118
AK100430
MSU ID LOC_Os03g63750.1
RAP ID Os03g0854500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Muthuramalingam P., Jeyasri R., Bharathi RKAS., Suba V., Pandian S.T.K., Ramesh M.
Genomics 2019   
Global integrated omics expression analyses of abiotic stress signaling HSF transcription factor genes in Oryza sativa L.: An in silico approach.
Lavania D., Dhingra A., Grover A.
Planta 2018  247(6)  1267-1276
Analysis of transactivation potential of rice (Oryza sativa L.) heat shock factors.
Mittal D., Enoki Y., Lavania D., Singh A., Sakurai H., Grover A.
FEBS J. 2011  278(17)  3076-85
Binding affinities and interactions among different heat shock element types and heat shock factors in rice (Oryza sativa L.).
Chauhan H., Khurana N., Agarwal P., Khurana P.
Mol. Genet. Genomics 2011  286(2)  171-87
Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
Wang C,Zhang Q,Shou HX
J Zhejiang Univ Sci B 2009  10  291-300
Identification and expression analysis of OsHsfs in rice.
TextPresso Search Search textpresso for HSFA1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to stress( GO:0006950 )
sequence-specific DNA binding( GO:0043565 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 18, 2020


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