Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol miR827
Gene Symbol Synonym miR827a, OsmiR827a, miR827, osa-miR827, osa-MIR827, OsMiR827, miR827b, osa-miR827b, osa-MIR827b
CGSNL Gene Name MICRORNA827
Gene Name Synonym MICRORNA827a, MICRORNA827b, osa-miRNA827b
Protein Name
Allele
Chromosome No. 2
Explanation OsSPX-MFS1 and OsSPX-MFS2 are both negatively regulated by osa-miR827 abundance. miRBASE accession: MI0010490. miR827 was upregulated by phosphate starvation and strongly induced by the combined stress of salt stress under conditions of potassium starvation (Jeong et al. 2011). predicted target: Os03g0289100, confirmed target: Os04g0573000 (Lacombe et al. 2008). TO:0020102: phosphate content. Osa-miR827a is encoded by a single locus mapping to an intergenic region on chromosome 2 (Lacombe et al. 2008).LM381194
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Ruan W., Guo M., Wu P., Yi K.
Plant Mol. Biol. 2016   
Phosphate starvation induced OsPHR4 mediates Pi-signaling and homeostasis in rice.
Guo M., Ruan W., Li C., Huang F., Zeng M., Liu Y., Yu Y., Ding X., Wu Y., Wu Z., Mao C., Yi K., Wu P., Mo X.
Plant Physiol. 2015  168(4)  1762-76
Integrative Comparison of the Role of the PHOSPHATE RESPONSE1 Subfamily in Phosphate Signaling and Homeostasis in Rice.
Wang S., Zhang S., Sun C., Xu Y., Chen Y., Yu C., Qian Q., Jiang D.A., Qi Y.
New Phytol. 2014  201(1)  91-103
Auxin response factor (OsARF12), a novel regulator for phosphate homeostasis in rice (Oryza sativa).
Shi J., Hu H., Zhang K., Zhang W., Yu Y., Wu Z., WU P.
J. Exp. Bot. 2014  65  859-870
The paralogous SPX3 and SPX5 genes redundantly modulate Pi homeostasis in rice
Wang C., Huang W., Ying Y., Li S., Secco D., Tyerman S., Whelan J., Shou H.
New Phytol. 2012  196(1)  139-48
Functional characterization of the rice SPX-MFS family reveals a key role of OsSPX-mfs1 in controlling phosphate homeostasis in leaves.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Lin S.-I., Santi C., Jobet E., Lacut E., El Kholti N., Karlowski W.M., Verdeil J.-L., Breitler J.C., Perin C., Ko S.-S., Guiderdoni E., Chiou T.-J., Echeverria M.
Plant Cell Physiol. 2010  51(12)  2119-2131
Complex regulation of two target genes encoding SPX-MFS proteins by rice miR827 in response to phosphate starvation.
Lacombe S,Nagasaki H,Santi C,Duval D,Piegu B,Bangratz M,Breitler JC,Guiderdoni E,Brugidou C,Hirsch J,Cao X,Brice C,Panaud O,Karlowski WM,Sato Y,Echeverria M
BMC Plant Biol 2008  8  123
Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.
TextPresso Search Search textpresso for miR827 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology gene silencing by miRNA( GO:0035195 )
micro-ribonucleoprotein complex( GO:0035068 )
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
cellular response to phosphate starvation( GO:0016036 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 11, 2018


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