Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR159A
Gene Symbol Synonym miR159a, osa-miR159a, osa-MIR159a, OsmiR159a.2, miR159a.2, OsmiR159a.1, miR159a.1, osa-miR159a.1, osa-miR159a.2
CGSNL Gene Name MICRORNA159A
Gene Name Synonym
Protein Name
Allele
Chromosome No. 1
Explanation miRBASE accession: MI0001092. predicted targets: Os03g0113500(a GT-2 like transcription factor), Os10g0516500 , confirmed target: Os10g0495200. AY551215. LM379305, LM381143.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. AK100209
MSU ID LOC_Os01g32259.1
RAP ID Os01g0507000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Lacombe S,Nagasaki H,Santi C,Duval D,Piegu B,Bangratz M,Breitler JC,Guiderdoni E,Brugidou C,Hirsch J,Cao X,Brice C,Panaud O,Karlowski WM,Sato Y,Echeverria M
BMC Plant Biol 2008  8  123
Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.
Luo YC,Zhou H,Li Y,Chen JY,Yang JH,Chen YQ,Qu LH
FEBS Lett. 2006  580  5111-6
Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development.
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005  37 (2)  75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
TextPresso Search Search textpresso for MIR159A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology micro-ribonucleoprotein complex( GO:0035068 )
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
gene silencing by miRNA( GO:0035195 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 15, 2015


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