Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PIP1A
Gene Symbol Synonym OsPIP1a, OsPIP1;1, PIP1a, RWC-1, PIP1-1, RWC1, OsPIP1-1, PIP1;1, PIP1-5
Gene Name Synonym Aquaporin PIP1-1, Plasma membrane intrinsic protein 1-1, Plasma membrane intrinsic protein 1a, Water channel protein RWC1, plasma membrane intrinsic protein 1-5
Allele Ospip1;1
Chromosome No. 2
Explanation AP005108. Q6EU94. AB009665. BE607367, AJ224327. CK046160. Water channel protein (WCP-I). TO:0000905: seed yield. PIP1-5 in Sharma et al. 2015. one of the predicted targets for Osa-miR820. TO:0020093: nitrogen content.
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance
Vegetative organ - Culm
Character as QTL - Germination
Biochemical character
cDNA Accession No. AK061769
MSU ID LOC_Os02g44630.1
RAP ID Os02g0666200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Gupta A., Singh A.N., Tiwari R.K., Sahu P.K., Yadav J., Srivastava A.K., Kumar S.
Plants (Basel) 2023  12(5) 
Salinity Alleviation and Reduction in Oxidative Stress by Endophytic and Rhizospheric Microbes in Two Rice Cultivars.
Wang J., Liu Y., Hu S., Xu J., Nian J., Cao X., Chen M., Cen J., Liu X., Zhang Z., Liu D., Zhu L., Hu J., Ren D., Gao Z., Shen L., Dong G., Zhang Q., Li Q., Yu S., Qian Q., Zhang G.
Int J Mol Sci 2022  23(15) 
<i>LEAF TIP RUMPLED 1</i> Regulates Leaf Morphology and salt tolerance in Rice.
He Y., Chen S., Liu K., Chen Y., Cheng Y., Zeng P., Zhu P., Xie T., Chen S., Zhang H., Cheng J.
Plant Biotechnol. J. 2022  20(7)  1346-1362
OsHIPL1, a hedgehog-interacting protein-like 1 protein, increases seed vigour in rice.
Shanmugam S., Boyett V.A., Khodakovskaya M.
PLoS ONE 2021  16(10)  e0258171
Enhancement of drought tolerance in rice by silencing of the OsSYT-5 gene.
Huang X., Wang Z., Huang J., Peng S., Xiong D.
Plant J. 2021   
Mesophyll conductance variability of rice aquaporin knockout lines at different growth stages and growing environments.
Liu A., Zhou Z., Yi Y., Chen G.
BMC Genomics 2020  21(1)  127
Transcriptome analysis reveals the roles of stem nodes in cadmium transport to rice grain.
Liu S., Fukumoto T., Gena P., Feng P., Sun Q., Li Q., Matsumoto T., Kaneko T., Zhang H., Zhang Y., Zhong S., Zeng W., Katsuhara M., Kitagawa Y., Wang A., Calamita G., Ding X.
Plant J. 2020  102(4)  779-796
Ectopic expression of a rice plasma membrane intrinsic protein (OsPIP1;3) promotes plant growth and water uptake.
Yan G., Fan X., Peng M., Yin C., Xiao Z., Liang Y.
Front Plant Sci 2020  11  260
Silicon Improves Rice Salinity Resistance by Alleviating Ionic Toxicity and Osmotic Constraint in an Organ-Specific Pattern.
Chu T.T.H., Hoang T.G., Trinh D.C., Bureau C., Meynard D., Vernet A., Ingouff M., Do N.V., Périn C., Guiderdoni E., Gantet P., Maurel C., Luu D.T.
Rice (N Y) 2018  11(1)  23
Sub-cellular markers highlight intracellular dynamics of membrane proteins in response to abiotic treatments in rice.
Liang J., Guo S., Sun B., Liu Q., Chen X., Peng H., Zhang Z., Xie Q.
Rice (N Y) 2018  11(1)  59
Constitutive expression of REL1 confers the rice response to drought stress and abscisic acid.
Sharma N., Tripathi A., Sanan-Mishra N.
Front Plant Sci 2015  6  333
Profiling the expression domains of a rice-specific microRNA under stress.
Wu F., Sheng P., Tan J., Chen X., Lu G., Ma W., Heng Y., Lin Q., Zhu S., Wang J., Wang J., Guo X., Zhang X., Lei C., Wan J.
J. Exp. Bot. 2014   
Plasma membrane receptor-like kinase Leaf Panicle 2 acts downstream of the DROUGHT AND SALT TOLERANCE transcription factor to regulate drought sensitivity in rice.
Scalera V.a, Gena P.a, Mastrodonato M.b, Kitagawa Y.c, Carulli S.a, Svelto M.a, Calamita G.a d
Plant Physiology and Biochemistry 2014  85  78-84
Functional reconstitution of a rice aquaporin water channel, PIP1;1, by a micro-batchwise methodology
Liu C., Fukumoto T., Matsumoto T., Gena P., Frascaria D., Kaneko T., Katsuhara M., Zhong S., Sun X., Zhu Y., Iwasaki I., Ding X., Calamita G., Kitagawa Y.
Plant Physiol. Biochem. 2013  63  151-8
Aquaporin OsPIP1;1 promotes rice salt resistance and seed germination.
Matsumoto T,Lian HL,Su WA,Tanaka D,Liu C,Iwasaki I,Kitagawa Y
Plant Cell Physiol. 2009  50  216-29
Role of the aquaporin PIP1 subfamily in the chilling tolerance of rice.
Kerrie L. Forrest, Bhave M.
Funct. Integr. Genomics 2007  7  263-289
Major intrinsic proteins (MIPs) in plants: a complex gene family with major impacts on plant phenotype
Guo L,Wang ZY,Lin H,Cui WE,Chen J,Liu M,Chen ZL,Qu LJ,Gu H
Cell Res 2006  16  277-86
Expression and functional analysis of the rice plasma-membrane intrinsic protein gene family.
Lian HL,Yu X,Lane D,Sun WN,Tang ZC,Su WA
Cell Res 2006  16  651-60
Upland rice and lowland rice exhibited different PIP expression under water deficit and ABA treatment.
Yu X,Peng YH,Zhang MH,Shao YJ,Su WA,Tang ZC
Cell Res 2006  16  599-608
Water relations and an expression analysis of plasma membrane intrinsic proteins in sensitive and tolerant rice during chilling and recovery.
Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M
Plant Cell Physiol. 2005  46(9)  1568-77
Identification of 33 rice aquaporin genes and analysis of their expression and function
S Kawasaki, C Borchert, M Deyholos, H Wang, S Brazille, K Kawai, D Galbraith, H J Bohnert
Plant Cell 2001  13(4)  889-905
Gene expression profiles during the initial phase of salt stress in rice.
Li,L., Li,S., Tao,Y. and Kitagawa,Y.
Plant Sci. 2000  154(1)  43-51
Molecular cloning of a novel water channel from rice: its products expression in Xenopus oocytes and involvement in chilling tolerance.
Malz,S. and Sauter,M.
Plant Mol. Biol. 1999  40(6)  985-995
Expression of two PIP genes in rapidly growing internodes of rice is not primarily controlled by meristem activity or cell expansion.
TextPresso Search Search textpresso for PIP1A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to symbiotic fungus( GO:0009610 )
response to symbiotic bacterium( GO:0009609 )
response to cadmium ion( GO:0046686 )
integral to membrane( GO:0016021 )
transmembrane transport( GO:0055085 )
response to water deprivation( GO:0009414 )
response to cold( GO:0009409 )
response to silicon dioxide( GO:0034021 )
seed germination( GO:0009845 )
response to abscisic acid stimulus( GO:0009737 )
response to salt stress( GO:0009651 )
transporter activity( GO:0005215 )
plasma membrane( GO:0005886 )
response to osmotic stress( GO:0006970 )
Trait Ontology drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
osmotic response sensitivity( TO:0000095 )
abscisic acid sensitivity( TO:0000615 )
root activity( TO:0000434 )
germination rate( TO:0000430 )
plant height( TO:0000207 )
tiller number( TO:0000346 )
leaf size( TO:0002637 )
leaf width( TO:0000370 )
leaf length( TO:0000135 )
leaf area( TO:0000540 )
rubisco content( TO:0000319 )
photosynthetic rate( TO:0001015 )
Plant Ontology 0 seed germination stage( PO:0007057 )
leaf( PO:0025034 )
Related Strains
Phenotype images
Last updated
Jun 22, 2023