Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HAP5A
Gene Symbol Synonym OsHAP5A, NF-YC, CBF-C, OsNF-YC1, Os-NF-YC1, NF-YC1, NFYC1 , OsNF-YC4-2, NF-YC4-2
Gene Name Synonym Nuclear factor Y C1 subunit, Nuclear factor Y C subunit 1, NUCLEAR FACTOR-Y subunit C1, NUCLEAR FACTOR-Y subunit NF-YC1, NF-YC subunit 1, NF-YC family 1
Chromosome No. 2
Explanation AB288041. LOC_Os02g07450. an AtNF-YC4 homolog. OsNF-YC4-2 in Li et al. 2015.
Trait Class Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK243429
MSU ID LOC_Os02g07450.1
RAP ID Os02g0170500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Yanga W., Lub Z., Xionga Y., Yaoa J.
The Crop Journal 2017  5(1)  21-31
Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice
Goretti D., Martignago D., Landini M., Brambilla V., Gómez-Ariza J., Gnesutta N., Galbiati F., Collani S., Takagi H., Terauchi R., Mantovani R., Fornara F.
PLoS Genet. 2017  13(1)  e1006530
Transcriptional and Post-transcriptional Mechanisms Limit HEADING DATE 1 (Hd1) Function to Adapt Rice to High Latitudes.
Li Q., Yan W., Chen H., Tan C., Han Z., Yao W., Li G., Yuan M., Xing Y.
J. Exp. Bot. 2016  67(6)  1759-68
Duplication of OsHAP family genes and their association with heading date in rice.
Hwang Y.H., Kim S.K., Lee K.C., Chung Y.S., Lee J.H., Kim J.K.
Plant Cell Rep. 2016  35(4)  857-65
Functional conservation of rice OsNF-YB/YC and Arabidopsis AtNF-YB/YC proteins in the regulation of flowering time.
Li L., Zheng W., Zhu Y., Ye H., Tang B., Arendsee Z.W., Jones D., Li R., Ortiz D., Zhao X., Du C., Nettleton D., Scott M.P., Salas-Fernandez MG., Yin Y., Wurtele E.S.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(47)  14734-9
QQS orphan gene regulates carbon and nitrogen partitioning across species via NF-YC interactions.
Chen M., Zhao Y., Zhuo C., Lu S., Guo Z.
Plant Biotechnol. J. 2014   
Overexpression of a NF-YC transcription factor from bermudagrass confers tolerance to drought and salinity in transgenic rice.
Liang M., Yin X., Lin Z., Zheng Q., Liu G., Zhao G.
Planta 2014  239(1)  107-26
Identification and characterization of NF-Y transcription factor families in Canola (Brassica napus L.).
Petroni K., Roderick W Kumimoto, Gnesutta N., Calvenzani V., Fornari M., Tonelli C., Ben F Holt, Mantovani R.
Plant Cell 2012  24(12)  4777-92
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.
Thirumurugan,T., Ito,Y., Kubo,T., Serizawa,A. and Kurata,N.
Mol. Genet. Genomics 2008  279(3)  279-289
Identification, characterization and interaction of HAP family genes in rice
TextPresso Search Search textpresso for HAP5A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology nucleus( GO:0005634 )
transcription( GO:0006350 )
sequence-specific DNA binding( GO:0043565 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
negative regulation of long-day photoperiodism, flowering( GO:0048579 )
cytoplasm( GO:0005737 )
Trait Ontology drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
days to heading( TO:0000137 )
abscisic acid sensitivity( TO:0000615 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Dec 13, 2017