|
Basic Information
|
|
CGSNL Gene Symbol
|
HAP2I
|
|
Gene Symbol Synonym
|
OsHAP2I, NF-YA, CBF-B, NF-YA8, OsNF-YA8, OsEnS-136, NFYA8
|
|
CGSNL Gene Name
|
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX
|
|
Gene Name Synonym
|
NUCLEAR FACTOR-Y subunit A8, NUCLEAR FACTOR-Y subunit NF-YA8, NF-YA transcription factor 8, endosperm-specific gene 136, NF-YA subunit 8, NF-YA family 8
|
|
Protein Name
|
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX
|
|
Allele
|
nf-ya8, nf-ya8-1, nf-ya8-2
|
|
Chromosome No.
|
10
|
|
Explanation
|
BR000373. GO:2000022: regulation of jasmonic acid mediated signaling pathway.
|
|
Trait Class
|
Seed - Morphological traits - Endosperm
Seed - Morphological traits - Grain shape
Tolerance and resistance - Disease resistance
Character as QTL - Grain quality
Character as QTL - Yield and productivity
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
EU847005
|
|
MSU ID
|
LOC_Os10g25850.1
|
|
RAP ID
|
Os10g0397900
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Sun L.Q., Bai Y., Wu J., Fan S.J., Chen S.Y., Zhang Z.Y., Xia J.Q., Wang S.M., Wang Y.P., Qin P., Li S.G., Xu P., Zhao Z., Xiang C.B., Zhang Z.S.
Plant Commun 2024 100999
OsNLP3 enhances grain weight and reduces grain chalkiness in rice.
|
|
Tan X., Zhang H., Yang Z., Wei Z., Li Y., Chen J., Sun Z.
PLoS Pathog. 2022 18(5) e1010548
NF-YA transcription factors suppress jasmonic acid-mediated antiviral defense and facilitate viral infection in rice.
|
|
Zhou J., Zhang R., Jia X., Tang X., Guo Y., Yang H., Zheng X., Qian Q., Qi Y., Zhang Y.
Plant Biotechnol. J. 2022 20(2) 310-322
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice.
|
|
E Z., Li T., Zhang H., Liu Z., Deng H., Sharma S., Wei X., Wang L., Niu B., Chen C.
J. Exp. Bot. 2018 69(10) 2495-2510
A group of Nuclear factor Y transcription factors are sub-functionalized during endosperm development in monocots.
|
|
Yanga W., Lub Z., Xionga Y., Yaoa J.
The Crop Journal 2017 5(1) 21-31
Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice
|
|
Li Q., Yan W., Chen H., Tan C., Han Z., Yao W., Li G., Yuan M., Xing Y.
J. Exp. Bot. 2016 67(6) 1759-68
Duplication of OsHAP family genes and their association with heading date in rice.
|
|
Lee D.K., Kim H.I., Jang G., Chung P.J., Jeong J.S., Kim Y.S., Bang S.W., Jung H., Choi Y.D., Kim J.K.
Plant Sci. 2015 241 199-210
The NF-YA transcription factor OsNF-YA7 confers drought stress tolerance of rice in an abscisic acid independent manner.
|
|
Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013 530(2) 236-47
Genome-wide analysis of endosperm-specific genes in rice.
|
|
Petroni K., Roderick W Kumimoto, Gnesutta N., Calvenzani V., Fornari M., Tonelli C., Ben F Holt, Mantovani R.
Plant Cell 2012 24(12) 4777-92
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.
|
|
Thirumurugan,T., Ito,Y., Kubo,T., Serizawa,A. and Kurata,N.
Mol. Genet. Genomics 2008 279(3) 279-289
Identification, characterization and interaction of HAP family genes in rice
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
response to nitrate( GO:0010167 )
jasmonic acid mediated signaling pathway( GO:0009867 )
response to jasmonic acid stimulus( GO:0009753 )
defense response to virus( GO:0051607 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
sequence-specific DNA binding( GO:0043565 )
cytoplasm( GO:0005737 )
|
|
Trait Ontology
|
viral disease resistance( TO:0000148 )
jasmonic acid sensitivity( TO:0000172 )
chalky endosperm( TO:0000266 )
starch content( TO:0000696 )
protein content( TO:0000598 )
nitrogen sensitivity( TO:0000011 )
|
|
Plant Ontology
|
endosperm( PO:0009089 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Oct 7, 2024
|
Update info.