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Basic Information
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CGSNL Gene Symbol
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HAP2D
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Gene Symbol Synonym
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OsHAP2D, NF-YA, CBF-B, NF-YA4, OsNF-YA4, NFYA4
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CGSNL Gene Name
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HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX
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Gene Name Synonym
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NUCLEAR FACTOR-Y subunit A4, NUCLEAR FACTOR-Y subunit NF-YA4, NF-YA transcription factor 4, NF-YA subunit 4, NF-YA family 4
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Protein Name
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HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX
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Allele
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Oshap2d
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Chromosome No.
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3
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Explanation
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AB288030. GO:2000022: regulation of jasmonic acid mediated signaling pathway.
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Trait Class
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Tolerance and resistance - Disease resistance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK069854
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MSU ID
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LOC_Os03g48970.1
LOC_Os03g48970.2
LOC_Os03g48970.3
LOC_Os03g48970.4
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RAP ID
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Os03g0696300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Jung H., Park H.J., Jo S.H., Lee A., Lee H.J., Kim H.S., Jung C., Cho H.S.
New Phytol. 2023 238(6) 2476-2494
Nuclear OsFKBP20-1b maintains SR34 stability and promotes the splicing of retained introns upon ABA exposure in rice.
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Tan X., Zhang H., Yang Z., Wei Z., Li Y., Chen J., Sun Z.
PLoS Pathog. 2022 18(5) e1010548
NF-YA transcription factors suppress jasmonic acid-mediated antiviral defense and facilitate viral infection in rice.
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Yanga W., Lub Z., Xionga Y., Yaoa J.
The Crop Journal 2017 5(1) 21-31
Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice
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Li Q., Yan W., Chen H., Tan C., Han Z., Yao W., Li G., Yuan M., Xing Y.
J. Exp. Bot. 2016 67(6) 1759-68
Duplication of OsHAP family genes and their association with heading date in rice.
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Lee D.K., Kim H.I., Jang G., Chung P.J., Jeong J.S., Kim Y.S., Bang S.W., Jung H., Choi Y.D., Kim J.K.
Plant Sci. 2015 241 199-210
The NF-YA transcription factor OsNF-YA7 confers drought stress tolerance of rice in an abscisic acid independent manner.
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Petroni K., Roderick W Kumimoto, Gnesutta N., Calvenzani V., Fornari M., Tonelli C., Ben F Holt, Mantovani R.
Plant Cell 2012 24(12) 4777-92
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.
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Thirumurugan,T., Ito,Y., Kubo,T., Serizawa,A. and Kurata,N.
Mol. Genet. Genomics 2008 279(3) 279-289
Identification, characterization and interaction of HAP family genes in rice
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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jasmonic acid mediated signaling pathway( GO:0009867 )
response to jasmonic acid stimulus( GO:0009753 )
defense response to virus( GO:0051607 )
CCAAT-binding factor complex( GO:0016602 )
transcription factor activity( GO:0003700 )
DNA binding( GO:0003677 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
response to abscisic acid stimulus( GO:0009737 )
sequence-specific DNA binding( GO:0043565 )
regulation of transcription, DNA-dependent( GO:0006355 )
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Trait Ontology
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abscisic acid sensitivity( TO:0000615 )
viral disease resistance( TO:0000148 )
jasmonic acid sensitivity( TO:0000172 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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Last updated
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Sep 19, 2023
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Update info.