Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HOX9
Gene Symbol Synonym Oshox9, OsHox9, OsHB2, HB2, OSHB2
CGSNL Gene Name HOMEOBOX GENE 9
Gene Name Synonym rice homeobox gene 9, Homeobox-leucine zipper protein HOX9, Homeodomain transcription factor HOX9, HD-ZIP protein HOX9, HOMEODOMAIN CONTAINING PROTEIN 2
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX9
Allele
Chromosome No. 10
Explanation EF555530. Q9AV49(japonica), A2Z8L4(indica). leucin zipper gene family.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. AK102603
RAP ID Os10g0480200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
Itoh J,Hibara K,Sato Y,Nagato Y
Plant Physiol. 2008  147  1960-75
Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
Nagasaki H, Itoh J, Hayashi K, Hibara K, Satoh-Nagasawa N, Nosaka M, Mukouhata M, Ashikari M, Kitano H, Matsuoka M, Nagato Y, Sato Y.
Proc. Natl. Acad. Sci. U.S.A. 2007  104(37)  14867-71
The small interfering RNA production pathway is required for shoot meristem initiation in rice.
TextPresso Search Search textpresso for HOX9 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 11, 2013


Login ID
Password
/rice/oryzabase