Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HOX29
Gene Symbol Synonym Oshox29, OsHox29, OSHB5, HB5
CGSNL Gene Name HOMEOBOX GENE 29
Gene Name Synonym rice homeobox gene 29, Homeobox-leucine zipper protein HOX29, Homeodomain transcription factor HOX29, HD-ZIP protein HOX29, HOMEODOMAIN CONTAINING PROTEIN 5
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX29
Allele
Chromosome No. 1
Explanation EF555550, CT845867, CB654749. AB374207. A2WLR5(indica), Q5QMZ9(japonica). START domain protein (Steroidogenic acute regulatory protein-related lipid transfer domain protein, StAR-related lipid transfer domain protein). GO:1904583: response to polyamine macromolecule.
Trait Class Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. AK112091
MSU ID LOC_Os01g10320.1
RAP ID Os01g0200300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang H., Liu M., Yin K., Liu H., Liu J., Yan Z.
J. Plant Physiol. 2024  295  154210
A novel OsHB5-OsAPL-OsMADS27/OsWRKY102 regulatory module regulates grain size in rice.
Mahtha S.K., Kumari K., Gaur V., Yadav G.
Comput Struct Biotechnol J 2023  21  3946-3963
Cavity architecture based modulation of ligand binding tunnels in plant START domains.
Yuan Z., Pan J., Chen C., Tang Y., Zhang H., Guo J., Yang X., Chen L., Li C., Zhao K., Wang Q., Yang B., Sun C., Deng X., Wang P.
Int J Mol Sci 2022  23(19) 
<i>DRB2</i> Modulates leaf rolling by Regulating Accumulation of MicroRNAs Related to Leaf Development in Rice.
Miyamoto M., Shimao S., Tong W., Motose H., Takahashi T.
Plants (Basel) 2019  8(8) 
Effect of Thermospermine on the Growth and Expression of Polyamine-Related Genes in Rice Seedlings.
Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019  12(1)  60
Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
Itoh J,Hibara K,Sato Y,Nagato Y
Plant Physiol. 2008  147  1960-75
Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
TextPresso Search Search textpresso for HOX29 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology grain size( TO:0000397 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 2, 2024

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