Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HOX2
Gene Symbol Synonym Oshox2, OsHox2
CGSNL Gene Name HOMEOBOX GENE 2
Gene Name Synonym rice homeobox gene 2, Homeobox-leucine zipper protein HOX2, Homeodomain transcription factor HOX2, HD-ZIP protein HOX2
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX2
Allele
Chromosome No. 6
Explanation EF555522, AF145726. Q5VPE3(japonica), Q84U86(indica).
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK105150
MSU ID LOC_Os06g04870.1
RAP ID Os06g0140700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhang T., You J., Zhang Y., Yao W., Chen W., Duan Q., Xiao W., Ye L., Zhou Y., Sang X., Ling Y., He G., Li Y.
New Phytol. 2021   
lf1 regulates the lateral organs polarity development in rice.
Mohanty B.
Front Genet 2021  12  639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
TextPresso Search Search textpresso for HOX2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription( GO:0006350 )
response to deep water( GO:0030912 )
nucleus( GO:0005634 )
sequence-specific DNA binding( GO:0043565 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
Trait Ontology submergence tolerance( TO:0000524 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 13, 2022


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