Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HOX16
Gene Symbol Synonym Oshox16, OsHox16
CGSNL Gene Name HOMEOBOX GENE 16
Gene Name Synonym rice homeobox gene 16, Homeobox-leucine zipper protein HOX16, Homeodomain transcription factor HOX16, HD-ZIP protein HOX16
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX16
Allele
Chromosome No. 2
Explanation Os02g49700. EF555537, AY559045. A2X980(indica), Q6YWR4(jponiac).
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK119592
MSU ID LOC_Os02g49700.1
LOC_Os02g49700.2
LOC_Os02g49700.3
RAP ID Os02g0729700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Su Z., Tang Y., Ritchey L.E., Tack D.C., Zhu M., Bevilacqua P.C., Assmann S.M.
Proc. Natl. Acad. Sci. U.S.A. 2018  115(48)  12170-12175
Genome-wide RNA structurome reprogramming by acute heat shock globally regulates mRNA abundance.
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
TextPresso Search Search textpresso for HOX16 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
sequence-specific DNA binding( GO:0043565 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
response to heat( GO:0009408 )
Trait Ontology heat tolerance( TO:0000259 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jul 16, 2019


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