Gene - Detail
Detail of Gene
Basic Information | |
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CGSNL Gene Symbol | HOX13 |
Gene Symbol Synonym | Oshox13, OsHox13 |
CGSNL Gene Name | HOMEOBOX GENE 13 |
Gene Name Synonym | rice homeobox gene 13, Homeobox-leucine zipper protein HOX13, Homeodomain transcription factor HOX13, HD-ZIP protein HOX13 |
Protein Name | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX13 |
Allele | |
Chromosome No. | 3 |
Explanation | EF555534. A2XDD6(indica), Q10QP3(japonica). |
Trait Class |
Tolerance and resistance - Stress tolerance
Other |
Expression | |
Sequence/Locus | |
cDNA Accession No. |
AK105644
|
MSU ID |
LOC_Os03g08960.1
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RAP ID |
Os03g0188900 |
Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
INSD Accession List (Test version) |
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Map | |
Locate(cM) | |
Link map | Classical linkage map |
References | |
Mohanty B.
Front Genet 2021 12 639654 Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008 66(1-2) 87-103 A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
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TextPresso Search | Search textpresso for HOX13 ( Recent references may be retrievable, but without any warranty ) |
DB Reference | |
Gramene ID | - |
Ontologies | |
Gene Ontology |
response to deep water( GO:0030912 )
plastid( GO:0009536 ) nucleus( GO:0005634 ) sequence-specific DNA binding( GO:0043565 ) transcription factor activity( GO:0003700 ) regulation of transcription, DNA-dependent( GO:0006355 ) transcription( GO:0006350 ) |
Trait Ontology |
submergence tolerance( TO:0000524 )
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Plant Ontology | - |
Related Strains | |
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Phenotype images | |
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Last updated | |
Jul 8, 2021 |