Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HOX12 |
| Gene Symbol Synonym | Oshox12, OsHox12 |
| CGSNL Gene Name | HOMEOBOX GENE 12 |
| Gene Name Synonym | rice homeobox gene 12, Homeobox-leucine zipper protein HOX12, Homeodomain transcription factor HOX12, HD-ZIP protein HOX12 |
| Protein Name | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX12 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | EF555533. A2XDK5(indica), Q10QF2(japonica). |
| Trait Class |
Reproductive organ - panicle
Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK073446
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| MSU ID |
LOC_Os03g10210.1
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| RAP ID |
Os03g0198600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Mohanty B.
Front Genet 2021 12 639654 Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Gao S., Fang J., Xu F., Wang W., Chu C.
Plant Cell 2016 28(3) 680-95 Rice HOX12 Regulates panicle exsertion by Directly Modulating the Expression of ELONGATED UPPERMOST INTERNODE1.
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Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008 66(1-2) 87-103 A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
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| TextPresso Search | Search textpresso for HOX12 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to deep water( GO:0030912 )
sequence-specific DNA binding( GO:0043565 ) transcription factor activity( GO:0003700 ) nucleus( GO:0005634 ) transcription( GO:0006350 ) regulation of transcription, DNA-dependent( GO:0006355 ) gibberellin metabolic process( GO:0009685 ) gibberellic acid homeostasis( GO:0010336 ) |
| Trait Ontology |
gibberellic acid content( TO:0002675 )
inflorescence exsertion( TO:0001002 ) submergence tolerance( TO:0000524 ) |
| Plant Ontology |
inflorescence( PO:0009049 )
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| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Jul 8, 2021 | |
