|
Basic Information
|
|
CGSNL 遺伝子シンボル
|
RAP1A
|
|
遺伝子シンボルシノニム
|
OsMADS15, FDRMADS3, RMADS215, MADS15, DEP
|
|
CGSNL 遺伝子名
|
RICE APETALA 1A
|
|
遺伝子名シノニム
|
MADS-box transcription factor 15, Protein APETALA1-like A, degenerative palea, MADS box gene15
|
|
タンパク質名
|
PROTEIN APETALA1-LIKE A
|
|
対立遺伝子
|
dep, Osmads15
|
|
染色体番号
|
7
|
|
解説
|
AP1-like MADS box protein. Q6Q9I2. AB003325, AF058698. a rice APETALA1 ortholog (an ortholog of Arabidopsis AP1).
|
|
形質クラス
|
耐性、抵抗性 - ストレス耐性
生殖器官
生殖器官 - 小穂、花、頴、芒
その他
生殖器官 - 出穂期
|
|
発現
|
小穂 - Sp3 - Formation of lemma primordium
小穂 - Sp4 - Formation of palea primordium
小穂 - Sp5 - Formation of lodicule primordia
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK072683
|
|
MSU ID
|
LOC_Os07g01820.1
LOC_Os07g01820.2
LOC_Os07g01820.3
LOC_Os07g01820.4
LOC_Os07g01820.5
LOC_Os07g01820.6
|
|
RAP ID
|
Os07g0108900
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
マップ
|
|
位置情報(cM)
|
|
|
リンケージマップ
|
Classical linkage map
|
|
文献
|
|
Mao X., Zheng X., Chen W., Li C.
Int J Mol Sci 2023 24(16)
Characterization and Gene Mapping of an Open-Glume <i>Oryza sativa</i> L. Mutant.
|
|
Kannan P., Chongloi G.L., Majhi B.B., Basu D., Veluthambi K., Vijayraghavan U.
Planta 2021 253(2) 39
Characterization of a new rice OsMADS1 null mutant generated by homologous recombination-mediated gene targeting.
|
|
Qu L., Chu Y.J., Lin W.H., Xue H.W.
PLoS Genet. 2021 17(12) e1009905
A secretory Phospholipase D hydrolyzes phosphatidylcholine to suppress rice heading time.
|
|
Cerise M., Giaume F., Galli M., Khahani B., Lucas J., Podico F., Tavakol E., Parcy F., Gallavotti A., Brambilla V., Fornara F.
New Phytol. 2021 229(1) 429-443
OsFD4 promotes the rice floral transition via florigen activation complex formation in the shoot apical meristem.
|
|
Osnato M., Matias-Hernandez L., Aguilar-Jaramillo AE., Kater M.M., Pelaz S.
Plant Physiol. 2020 183(4) 1663-1680
Genes of the <i>RAV</i> Family Control Heading Date and Carpel Development in Rice.
|
|
Yang C., Liu X., Li D., Zhu X., Wei Z., Feng Z., Zhang L., He J., Mou C., Jiang L., Wan J.
Plant Sci. 2019 288 110239
OsLUGL is involved in the regulating auxin level and OsARFs expression in rice (Oryza sativa L.).
|
|
Fang M., Zhou Z., Zhou X., Yang H., Li M., Li H.
PeerJ 2019 7 e6422
Overexpression of <i>OsFTL10</i> induces early flowering and improves drought tolerance in <i>Oryza sativa</i> L.
|
|
Yang Z., Liu L., Sun L., Yu P., Zhang P., Abbas A., Xiang X., Wu W., Zhang Y., Cao L., Cheng S.
Plant Mol. Biol. 2019 99(1-2) 175-191
osms1 functions as a transcriptional activator to regulate programmed tapetum development and pollen exine formation in rice.
|
|
Yin X., Liu X., Xu B., Lu P., Dong T., Yang D., Ye T., Feng Y.Q., Wu Y.
J. Exp. Bot. 2019 70(15) 3895-3909
OsMADS18, a membrane-bound MADS-box transcription factor, modulates plant architecture and the abscisic acid response in rice.
|
|
Cai M., Chen S., Wu M., Zheng T., Zhou L., Li C., Zhang H., Wang J., Xu X., Chai J., Ren Y., Guo X., Zhang X., Lei C., Cheng Z., Wang J., Jiang L., Zhai H., Wang H., Zhu S., Wan J.
Plant Cell Rep. 2019 38(5) 521-532
Early heading 7 interacts with DTH8, and regulates flowering time in rice.
|
|
Phule A.S., Barbadikar K.M., Maganti S.M., Seguttuvel P., Subrahmanyam D., Babu MBBP., Kumar P.A.
Sci Rep 2019 9(1) 5235
RNA-seq reveals the involvement of key genes for aerobic adaptation in rice.
|
|
Kaneko-Suzuki M., Kurihara-Ishikawa R., Okushita-Terakawa C., Kojima C., Nagano-Fujiwara M., Ohki I., Tsuji H., Shimamoto K., Taoka K.I.
Plant Cell Physiol. 2018 59(3) 458-468
TFL1-Like Proteins in Rice Antagonize Rice FT-Like Protein in Inflorescence Development by Competition for Complex Formation with 14-3-3 and FD.
|
|
Wu W., Zhang Y., Zhang M., Zhan X., Shen X., Yu P., Chen D., Liu Q., Sinumporn S., Hussain K., Cheng S., Cao L.
Biochem. Biophys. Res. Commun. 2018 495(1) 1349-1355
The RICE CONSTANS-like protein OsCOL15 suppresses flowering by promoting Ghd7 and repressing RID1.
|
|
Yu H., Ruan B., Wang Z., Ren D., Zhang Y., Leng Y., Zeng D., Hu J., Zhang G., Zhu L., Gao Z., Chen G., Guo L., Chen W., Qian Q.
Front Plant Sci 2017 8 486
Fine Mapping of a Novel defective glume 1 (dg1) Mutant, Which Affects Vegetative and Spikelet Development in Rice.
|
|
Zhang T., Li Y., Ma L., Sang X., Ling Y., Wang Y., Yu P., Zhuang H., Huang J., Wang N., Zhao F., Zhang C., Yang Z., Fang L., He G.
Proc. Natl. Acad. Sci. U.S.A. 2017
LATERAL FLORET 1 induced the three-florets spikelet in rice.
|
|
Brambilla V., Martignago D., Goretti D., Cerise M., Somssich M., de Rosa M., Galbiati F., Shrestha R., Lazzaro F., Simon R., Fornara F.
Plant Cell 2017 29(11) 2801-2816
Antagonistic Transcription Factor Complexes Modulate the Floral Transition in Rice.
|
|
Song S., Chen Y., Liu L., Wang Y., Bao S., Zhou X., Teo Z.W., Mao C., Gan Y., Yu H.
Plant Cell 2017 29(3) 491-507
OsFTIP1-Mediated Regulation of Florigen Transport in Rice Is Negatively Regulated by the Ubiquitin-Like Domain Kinase OsUbDKgamma4.
|
|
Wu W., Zheng X.M., Chen D., Zhang Y., Ma W., Zhang H., Sun L., Yang Z., Zhao C., Zhan X., Shen X., Yu P., Fu Y., Zhu S., Cao L., Cheng S.
Plant Sci. 2017 260 60-69
OsCOL16, encoding a CONSTANS-like protein, represses flowering by up-regulating Ghd7 expression in rice.
|
|
Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015 27(5) 1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
|
|
Ren D., Rao Y., Wu L., Xu Q., Li Z., Yu H., Zhang Y., Leng Y., Hu J., Zhu L., Gao Z., Dong G., Zhang G., Guo L., Zeng D., Qian Q.
J Integr Plant Biol 2015
The pleiotropic ABNORMAL FLOWER AND DWARF1 affects plant height, floral development and grain yield in rice.
|
|
Tamaki S., Tsuji H., Matsumoto A., Fujita A., Shimatani Z., Terada R., Sakamoto T., Kurata T., Shimamoto K.
Proc. Natl. Acad. Sci. U.S.A. 2015 112(8) E901-10
FT-like proteins induce transposon silencing in the shoot apex during floral induction in rice.
|
|
Marathi B., Jena K.K.
Euphytica 2014 201 1-14
Floral traits to enhance outcrossing for higher hybrid seed production in rice: present status and future prospects
|
|
Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013 64(7) 1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
|
|
Taoka K., Ohki I., Tsuji H., Kojima C., Shimamoto K.
Trends Plant Sci. 2013 18(5) 287-94
Structure and function of florigen and the receptor complex.
|
|
Wu W., Zheng X.M., Lu G., Zhong Z., Gao H., Chen L., Wu C., Wang H.J., Wang Q., Zhou K., Wang J.L., Wu F., Zhang X., Guo X., Cheng Z., Lei C., Lin Q., Jiang L., Wang H., Ge S., Wan J.
Proc. Natl. Acad. Sci. U.S.A. 2013 110(8) 2775-80
Association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia.
|
|
Tsuji H., Nakamura H., Taoka K., Shimamoto K.
Plant Cell Physiol. 2013 54(3) 385-97
Functional diversification of FD transcription factors in rice, components of florigen activation complexes.
|
|
Kobayashi K., Yasuno N., Sato Y., Yoda M., Yamazaki R., Kimizu M., Yoshida H., Nagamura Y., Kyozuka J.
Plant Cell 2012 24(5) 1848-59
inflorescence meristem Identity in Rice Is Specified by Overlapping Functions of Three AP1/FUL-Like MADS Box Genes and PAP2, a SEPALLATA MADS Box Gene.
|
|
Taoka K., Ohki I., Tsuji H., Furuita K., Hayashi K., Yanase T., Yamaguchi M., Nakashima C., Purwestri Y.A., Tamaki S., Ogaki Y., Shimada C., Nakagawa A., Kojima C., Shimamoto K.
Nature 2011 476(7360) 332-5
14-3-3 proteins act as intracellular receptors for rice Hd3a florigen.
|
|
Wang K., Tang D., Hong L., Xu W., Huang J., Li M., Gu M., Xue Y., Cheng Z.
PLoS Genet. 2010 6(1) e1000818
DEP and AFO regulate reproductive habit in rice.
|
|
Komiya R., Yokoi S., Shimamoto K.
Development 2009 136(20) 3443-50
A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice.
|
|
Komiya R,Ikegami A,Tamaki S,Yokoi S,Shimamoto K
Development 2008 135 767-74
Hd3a and RFT1 are essential for flowering in rice.
|
|
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
|
|
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003 44(12) 1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
|
|
Kyozuka,J., Kobayashi,T., Morita,M. and Shimamoto,K.
Plant Cell Physiol. 2000 41(6) 710-718
Spatially and temporally regulated expression of rice MADS bos genes with similarity to Arabidopsis class A, B, C genes
|
|
Lim J, Moon YH, An G, Jang SK.
Plant Mol. Biol. 2000 44(4) 513-527
Two rice MADS domain proteins interact with OsMADS1.
|
|
Moon,Y.H., Kang,H.G., Jung,J.Y., Jeon,J.S., Sung,S.K. and An,G.
Plant Physiol. 1999 120(4) 1193-1204
Determination of the motif responsible for interaction between the rice APETALA1/AGAMOUS-LIKE9 family proteins using a yeast two-hybrid system.
|
|
TextPresso Search
|
Search textpresso for RAP1A
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
オントロジー
|
|
Gene Ontology
|
transcription( GO:0006350 )
vegetative to reproductive phase transition( GO:0010228 )
reproductive developmental process( GO:0003006 )
transcription factor activity( GO:0003700 )
protein binding( GO:0005515 )
nucleus( GO:0005634 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
|
|
Trait Ontology
|
-
|
|
Plant Ontology
|
plant egg cell( PO:0020094 )
|
|
関連系統
|
|
-
|
|
形質画像
|
|
-
|
|
更新日
|
|
2023-11-27 14:26:02.458
|
更新情報
フィードバックはこちら