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Basic Information
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CGSNL 遺伝子シンボル
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RAG
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遺伝子シンボルシノニム
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MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1, rf3
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CGSNL 遺伝子名
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RICE AGAMOUS
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遺伝子名シノニム
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MADS box gene3, MADS-box transcription factor 3, Protein AGAMOUS-like, fertility restoration 3
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タンパク質名
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PROTEIN AGAMOUS-LIKE
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対立遺伝子
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mads3-1, mads3-2, mads3-3, mads3-4, osmads3, osmads3-2, osmads3-3
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染色体番号
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1
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解説
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鱗皮が葯に変化する。Q40704. floral homeotic C-class gene. L37528. a rice homolog of AGAMOUS. KC611053-KC611064 (O. sativa and wild rice species, partial cds).
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形質クラス
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生殖器官 - 穂
生殖器官 - 小穂、花、頴、芒
生殖器官 - 受粉、受精、稔性 - 雄性不稔
その他
生殖器官 - 花序
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発現
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小穂 - Sp6 - Formation of stamen primordia
小穂 - Sp7 - Formation of carpel primordium
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Sequence/Locus
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cDNA Accession No.
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AK108568
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MSU ID
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LOC_Os01g10504.1
LOC_Os01g10504.2
LOC_Os01g10504.3
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RAP ID
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Os01g0201700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Gu Z., Gong J., Zhu Z., Li Z., Feng Q., Wang C., Zhao Y., Zhan Q., Zhou C., Wang A., Huang T., Zhang L., Tian Q., Fan D., Lu Y., Zhao Q., Huang X., Yang S., Han B.
Nat. Genet. 2023 55(10) 1745-1756
Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis.
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Kamara N., Jiao Y., Huang W., Cao L., Zhu L., Zhao C., Huang X., Shivute F.N., Liu X., Wu J., Shahid M.Q.
Front Plant Sci 2023 14 1229870
Comparative cytological and transcriptome analyses of <i>ny2</i> mutant delayed degeneration of tapetal cells and promotes abnormal microspore development in neo-tetraploid rice.
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Li M., Fu D., Xu T., Wu C.
Int J Mol Sci 2021 22(15)
<i>VPB1</i> Encoding BELL-like homeodomain Protein Is Involved in Rice Panicle Architecture.
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Hu J., Huang L., Chen G., Liu H., Zhang Y., Zhang R., Zhang S., Liu J., Hu Q., Hu F., Wang W., Ding Y.
Rice (N Y) 2021 14(1) 90
The Elite Alleles of OsSPL4 Regulate grain size and Increase Grain Yield in Rice.
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Wu T., Ali A., Wang J., Song J., Fang Y., Zhou T., Luo Y., Zhang H., Chen X., Liao Y., Liu Y., Xu P., Wu X.
BMC Plant Biol. 2021 21(1) 390
A homologous gene of OsREL2/ASP1, ASP-LSL regulates pleiotropic phenotype including long sterile lemma in rice.
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Dreni L., Ravasio A., Gonzalez-Schain N., Jacchia S., da Silva GJ., Ricagno S., Russo R., Caselli F., Gregis V., Kater M.M.
Front Plant Sci 2020 11 637
Functionally Divergent Splicing Variants of the Rice AGAMOUS Ortholog OsMADS3 Are Evolutionary Conserved in Grasses.
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Duan Y., Chen Y., Li W., Pan M., Qu X., Shi X., Cai Z., Liu H., Zhao F., Kong L., Ye Y., Wang F., Xue Y., Wu W.
Plant Physiol. 2019 181(4) 1600-1614
<i>RETINOBLASTOMA-RELATED</i> Genes Specifically Control Inner Floral Organ Morphogenesis and pollen Development in Rice.
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Wang L., Yuan J., Ma Y., Jiao W., Ye W., Yang D.L., Yi C., Chen Z.J.
Mol Plant 2018 11(2) 300-314
Rice Interploidy Crosses Disrupt Epigenetic Regulation, Gene Expression, and Seed Development.
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Sun L., Xiang X., Yang Z., Yu P., Wen X., Wang H., Abbas A., Muhammad Khan R., Zhang Y., Cheng S., Cao L.
Int J Mol Sci 2018 19(12)
<i>OsGPAT3</i> Plays a Critical Role in anther wall Programmed Cell Death and pollen Development in Rice.
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Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018 675 285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
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Yu H., Ruan B., Wang Z., Ren D., Zhang Y., Leng Y., Zeng D., Hu J., Zhang G., Zhu L., Gao Z., Chen G., Guo L., Chen W., Qian Q.
Front Plant Sci 2017 8 486
Fine Mapping of a Novel defective glume 1 (dg1) Mutant, Which Affects Vegetative and Spikelet Development in Rice.
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Lin H., Yu J., Pearce S.P., Zhang D., Wilson Z.A.
Plant J. 2017 92(6) 1076-1091
RiceAntherNet: a gene co-expression network for identifying anther and pollen development genes.
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Ko S.S., Li M.J., Lin Y.J., Hsing H.X., Yang T.T., Chen T.K., Jhong C.M., Ku M.S.
Front Plant Sci 2017 8 1258
Tightly Controlled Expression of bHLH142 Is Essential for Timely Tapetal Programmed Cell Death and pollen Development in Rice.
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Cao H., Li X., Wang Z., Ding M., Sun Y., Dong F., Chen F., Liu L., Doughty J., Li Y., Liu Y.X.
Plant Physiol. 2015 168(4) 1389-405
histone H2B Monoubiquitination Mediated by HISTONE MONOUBIQUITINATION1 and HISTONE MONOUBIQUITINATION2 Is Involved in Anther Development by Regulating Tapetum Degradation-Related Genes in Rice.
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Nayar S., Kapoor M., Kapoor S.
J. Exp. Bot. 2014 65(18) 5339-50
Post-translational regulation of rice MADS29 function: homodimerization or binary interactions with other seed-expressed MADS proteins modulate its translocation into the nucleus.
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Zhu,T., Xu,P.Z., Liu,J.P., Peng,S., Mo,X.C. and Gao,L.Z.
Mol. Phylogenet. Evol. 2014 70 348-361
Phylogenetic relationships and genome divergence among the AA- genome species of the genus Oryza as revealed by 53 nuclear genes and 16 intergenic regions
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Marathi B., Jena K.K.
Euphytica 2014 201 1-14
Floral traits to enhance outcrossing for higher hybrid seed production in rice: present status and future prospects
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Sato H., Yoshida K., Mitsuda N., Ohme-Takagi M., Takamizo T.
Plant Sci. 2012 183 183-9
Male-sterile and cleistogamous phenotypes in tall fescue induced by chimeric repressors of SUPERWOMAN1 and OsMADS58.
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Dreni L., Pilatone A., Yun D., Erreni S., Pajoro A., Caporali E., Zhang D., Kater M.M.
Plant Cell 2011 23(8) 2850-63
Functional analysis of all AGAMOUS subfamily members in rice reveals their roles in reproductive organ identity determination and meristem determinacy.
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Li H., Liang W., Hu Y., Zhu L., Yin C., Xu J., Dreni L., Kater M.M., Zhang D.
Plant Cell 2011 23(7) 2536-52
Rice MADS6 interacts with the floral homeotic genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in specifying floral organ identities and meristem fate.
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Hu L,Liang W,Yin C,Cui X,Zong J,Wang X,Hu J,Zhang D
Plant Cell 2011 23(2) 515-33
Rice MADS3 Regulates ROS Homeostasis during Late Anther Development.
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Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
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Yamaguchi,T., Lee,D.Y., Miyao,A., Hirochika,H., An,G. and Hirano,H.Y.
Plant Cell 2006 18 15-28
Functional diversification of the two C-class MADS box genes OSMADS3 and OSMADS58 in Oryza sativa.
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Prasad K., Parameswaran S., Vijayraghavan U.
The Plant journal : for cell and molecular biology 2005 43(6) 915-28
OsMADS1, a rice MADS-box factor, controls differentiation of specific cell types in the lemma and palea and is an early-acting regulator of inner floral organs.
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Kyozuka, J. and K. Shimamoto
Plant Cell Physiol. 2002 43 130-135.
Ectopic expression of OsMADS3, a rice ortholog of AGAMOUS, caused a homeotic transformation of lodicules to stamens in transgenic rice plants.
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Kyozuka,J., Kobayashi,T., Morita,M. and Shimamoto,K.
Plant Cell Physiol. 2000 41(6) 710-718
Spatially and temporally regulated expression of rice MADS bos genes with similarity to Arabidopsis class A, B, C genes
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Kang,H.G., Noh,Y.S., Chung,Y.Y., Costa,M.A., An,K. and An,G.
Plant Mol. Biol. 1995 29(1) 1-10
Phenotypic alterations of petal and sepal by ectopic expression of a rice MADS box gene in tobacco.
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TextPresso Search
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Search textpresso for RAG
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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オントロジー
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Gene Ontology
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flower development( GO:0009908 )
cell differentiation( GO:0030154 )
sequence-specific DNA binding( GO:0043565 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
anther development( GO:0048653 )
inflorescence development( GO:0010229 )
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Trait Ontology
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stamen anatomy and morphology trait( TO:0000215 )
lodicule anatomy and morphology trait( TO:0006009 )
lodicule development trait( TO:0006023 )
flower development trait( TO:0000622 )
inflorescence development trait( TO:0000621 )
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Plant Ontology
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stamen( PO:0009029 )
lodicule( PO:0009036 )
anther development stage( PO:0001004 )
flower development stage( PO:0007615 )
inflorescence development stage( PO:0001083 )
lodicule development stage( PO:0001049 )
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関連系統
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形質画像
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更新日
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2024-01-17 14:54:21.569
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更新情報
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