Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RAB16B
Gene Symbol Synonym rab21, OsLEA28, OsRAB16D, OsRab16d, Rab16d, OsRAB16b, XERO1, OsXERO1, OsRD22, RD22
Gene Name Synonym Dehydrin Rab16B, RAB(RESPONSIVE TO ABA) GENE 16B, late embryogenesis abundant protein 28
Protein Name DEHYDRIN RAB16B
Allele rab16Bj
Chromosome No. 11
Explanation Y00842. Q2R4Z5(japonica), A2ZDX8(indica). AF333275 (promoter sequence). EF444533. OsRAB16D in Nakashima et al. 2013, Huang et al. 2018, Yoo et al. 2023. One of three hub genes in DEGs identified among AG (Anaerobic germination) stress, cold stress and conbined AG and cold stresses (Thapa et al. 2023).
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK063517
MSU ID LOC_Os11g26780.1
RAP ID Os11g0454200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Yoo Y., Yoo Y.H., Lee D.Y., Jung K.H., Lee S.W., Park J.C.
Antioxidants (Basel) 2023  12(11) 
Caffeine Produced in Rice Plants Provides Tolerance to Water-Deficit Stress.
Liu J., Shen L., Guo L., Zhang G., Gao Z., Zhu L., Hu J., Dong G., Ren D., Zhang Q., Li Q., Zeng D., Yan C., Qian Q.
Rice (N Y) 2023  16(1)  47
OsSTS, a Novel Allele of Mitogen-Activated Protein Kinase Kinase 4 (OsMKK4), Controls grain size and salt tolerance in Rice.
Mizobuchi R., Sugimoto K., Tsushima S., Fukuoka S., Tsuiki C., Endo M., Mikami M., Saika H., Sato H.
Sci Rep 2023  13(1)  3947
A MAPKKK gene from rice, RBG1res, confers resistance to Burkholderia glumae through negative regulation of ABA.
Thapa R., Tabien R.E., Johnson C.D., Septiningsih E.M.
BMC Genomics 2023  24(1)  185
Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress.
Yu N., Liang Y., Wang Q., Peng X., He Z., Hou X.
Sci Rep 2022  12(1)  6736
Transcriptomic analysis of OsRUS1 overexpression rice lines with rapid and dynamic leaf rolling morphology.
Pan J., Li Z., Wang Q., Yang L., Yao F., Liu W.
Plant Sci. 2020  290  110318
An S-domain receptor-like kinase, OsESG1, regulates early crown root development and drought resistance in rice.
Zhang Y., Du H., Gui Y., Xu F., Liu J., Zhang J., Xu W.
J. Exp. Bot. 2020  71(9)  2740-2751
Moderate water stress in rice induces rhizosheath formation associated with abscisic acid and auxin responses.
Han R., He X., Pan X., Shi Q., Wu Z.
Rice (N Y) 2020  13(1)  16
Enhancing xanthine dehydrogenase activity is an effective way to delay leaf senescence and increase rice yield.
Huang L., Zhang M., Jia J., Zhao X., Huang X., Ji E., Ni L., Jiang M.
Plant Cell Physiol. 2018  59(5)  916-929
An Atypical Late Embryogenesis Abundant Protein OsLEA5 Plays a Positive Role in ABA-Induced Antioxidant Defense in Oryza sativa L.
Chang Y., Nguyen B.H., Xie Y., Xiao B., Tang N., Zhu W., Mou T., Xiong L.
Front Plant Sci 2017  8  1102
Co-overexpression of the Constitutively Active Form of OsbZIP46 and ABA-Activated Protein Kinase SAPK6 Improves Drought and Temperature Stress Resistance in Rice.
Lou D., Wang H., Liang G., Yu D.
Front Plant Sci 2017  8  993
OsSAPK2 Confers Abscisic Acid Sensitivity and Tolerance to Drought Stress in Rice.
Dey A., Samanta M.K., Gayen S., Sen S.K., Maiti M.K.
PLoS ONE 2016  11(3)  e0150763
Enhanced Gene Expression Rather than Natural Polymorphism in Coding Sequence of the OsbZIP23 Determines drought tolerance and Yield Improvement in Rice Genotypes.
Tang N., Ma S., Zong W., Yang N., Lv Y., Yan C., Guo Z., Li J., Li X., Xiang Y., Song H., Xiao J., Li X., Xiong L.
Plant Cell 2016   
MODD mediates deactivation and degradation of OsbZIP46 to negatively regulate ABA signaling and drought resistance in rice.
Chen H., Lan H., Huang P., Zhang Y., Yuan X., Huang X., Huang J., Zhang H.
Genet. Mol. Res. 2015  14(4)  11994-2005
Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice.
Khattab H.I.a, Emam M.A.b, Emam M.M.a, Helal N.M.a, Mohamed M.R.b
Biol. Plant. 2014  58  265-273
Effect of selenium and silicon on transcription factors NAC5 and DREB2A involved in drought-responsive gene expression in rice
Wei S., Hu W., Deng X., Zhang Y., Liu X., Zhao X., Luo Q., Jin Z., Li Y., Zhou S., Sun T., Wang L., Yang G., He G.
BMC Plant Biol. 2014  14  133
A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility.
Nakashima K., Jan A., Todaka D., Maruyama K., Goto S., Shinozaki K., Yamaguchi-Shinozaki K.
Planta 2014  239(1)  47-60
Comparative functional analysis of six drought-responsive promoters in transgenic rice.
Cheng,X., Liu,G., Ye,G., Wang,H., Shen,X., Wu,K., Xie,J. and Altosaar,I.
Gene 2009  430(1-2)  132-139
Screening and cloning of antimicrobial DNA sequences using a vital staining method
Wang X. S., Zhu H. B., Jin G. L., Liu H. L., Wu W. R., Zhu J.
Plant Science 2007  172  414-420
Genome-scale identification and analysis of LEA genes in rice (Oryza sativa L.)
Xiao,F.H. and Xue,G.P.
Plant Cell Rep. 2001  20(7)  667-673
Analysis of the promoter activity of late embryogenesis abundant protein genes in barley seedlings under conditions of water deficit
Saijo,Y., Hata,S., Kyozuka,J., Shimamoto,K. and Izui,K.
Plant J. 2000  23(3)  319-327
Over-expression of a single Ca2+-dependent protein kinase confers both cold and salt/drought tolerance on rice plants.
A Ono, T Izawa, N H Chua, K Shimamoto
Plant Physiol. 1996  112(2)  483-91
The rab16B promoter of rice contains two distinct abscisic acid-responsive elements.
Yamaguchi-Shinozaki K, Mundy J, Chua NH.
Plant Mol. Biol. 1990  14(1)  29-39
Four tightly linked rab genes are differentially expressed in rice.
Mundy J, Yamaguchi-Shinozaki K, Chua NH.
Proc. Natl. Acad. Sci. U.S.A. 1990  87(4)  1406-10
Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene.
Mundy,J. and Chua,N.H.
EMBO J. 1988  7(8)  2279-2286
Abscisic acid and water-stress induce the expression of a novel rice gene.
TextPresso Search Search textpresso for RAB16B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to hypoxia( GO:0001666 )
response to flooding( GO:0009413 )
response to anoxia( GO:0034059 )
defense response to bacterium( GO:0042742 )
response to stress( GO:0006950 )
response to water( GO:0009415 )
response to water deprivation( GO:0009414 )
response to abscisic acid stimulus( GO:0009737 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
abscisic acid mediated signaling( GO:0009738 )
Trait Ontology drought tolerance( TO:0000276 )
abscisic acid sensitivity( TO:0000615 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
water stress trait( TO:0000237 )
bacterial disease resistance( TO:0000315 )
oxygen sensitivity( TO:0000015 )
flooding related trait( TO:0000114 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
May 20, 2024