Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol ATP6
Gene Symbol Synonym atp6, OsPOX1, prx3, POX1
CGSNL Gene Name ATPASE SUBUNIT 6
Gene Name Synonym peroxidase 1, class III peroxidase 3
Protein Name ATPASE SUBUNIT 6
Allele
Chromosome No. 1
Explanation dicistronic gene atp6-orf79, Rf1 promotes processing of atp6-orf79 transcript. BN000532.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK061583
MSU ID LOC_Os01g15830.1
RAP ID Os01g0263300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Feng Z., Xu Y., Xie Z., Yang Y., Lu G., Jin Y., Wang M., Liu M., Yang H., Li W., Liang Z.
Plants (Basel) 2024  13(12) 
Overexpression of Abscisic Acid Biosynthesis Gene <i>OsNCED3</i> Enhances Survival Rate and Tolerance to Alkaline Stress in Rice Seedlings.
Ullah A., Lin Y.J., Zhang H., Yu X.Z.
Toxics 2023  12(1) 
Identification of the Key Genes Involved in Proline-Mediated Modification of Cell Wall Components in Rice Seedlings under Trivalent Chromium Exposure.
Li J., Meng L., Ren S., Jia C., Liu R., Jiang H., Chen J.
Plants (Basel) 2023  12(17) 
<i>OsGSTU17</i>, a Tau Class Glutathione S-Transferase Gene, Positively Regulates Drought Stress Tolerance in <i>Oryza sativa</i>.
Huang P., Ding Z., Duan M., Xiong Y., Li X., Yuan X., Huang J.
Int J Mol Sci 2023  24(7) 
<i>OsLUX</i> Confers Rice cold tolerance as a Positive Regulatory Factor.
Guo Z., Cai L., Liu C., Chen Z., Guan S., Ma W., Pan G.
Sci Rep 2022  12(1)  6224
Low-temperature stress affects reactive oxygen species, osmotic adjustment substances, and antioxidants in rice (Oryza sativa L.) at the reproductive stage.
Luo C., Min W., Akhtar M., Lu X., Bai X., Zhang Y., Tian L., Li P.
Int J Mol Sci 2022  23(20) 
Melatonin Enhances Drought Tolerance in Rice Seedlings by Modulating Antioxidant Systems, Osmoregulation, and Corresponding Gene Expression.
Lu X., Min W., Shi Y., Tian L., Li P., Ma T., Zhang Y., Luo C.
Front Plant Sci 2022  13  849553
Exogenous Melatonin Alleviates Alkaline Stress by Removing Reactive Oxygen Species and Promoting Antioxidant Defence in Rice Seedlings.
Shim J.S., Park S.H., Lee D.K., Kim Y.S., Park S.C., Redillas MCFR., Seo J.S., Kim J.K.
Rice (N Y) 2021  14(1)  31
The rice GLYCINE-RICH PROTEIN 3 Confers drought tolerance by Regulating mRNA Stability of ROS Scavenging-Related Genes.
Wang B., Li J.
Plant Cell 2019  31(7)  1416-1417
Understanding the Molecular Bases of Agronomic Trait Improvement in Rice.
Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017  68(17)  4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
Leng Y., Yang Y., Ren D., Huang L., Dai L., Wang Y., Chen L., Tu Z., Gao Y., Li X., Zhu L., Hu J., Zhang G., Gao Z., Guo L., Kong Z., Lin Y., Qian Q., Zeng D.
Plant Physiol. 2017   
A rice pectate lyase-LIKE gene is required for plant growth and leaf senescence.
Cai W., Liu W., Wang W.S., Fu Z.W., Han T.T., Lu Y.T.
PLoS ONE 2015  10(6)  e0131599
Overexpression of Rat Neurons nitric oxide synthase in Rice Enhances Drought and Salt Tolerance.
Kim S.H., Choi H.S., Cho Y.C., Kim S.R.
Journal of Plant Biology 2012  55  123-131
Cold-Responsive Regulation of a Flower-Preferential class III peroxidase Gene, OsPOX1, in Rice (Oryza sativa L.)
Kazama T, Nakamura T, Watanabe M, Sugita M, Toriyama K.
Plant J. 2008  55(4):  619-28
Suppression mechanism of mitochondrial ORF79 accumulation by Rf1 protein in BT-type cytoplasmic male sterile rice.
Wang,Z., Zou,Y., Li,X., Zhang,Q., Chen,L., Wu,H., Su,D., Chen,Y., Guo,J., Luo,D., Long,Y., Zhong,Y. and Liu,Y.G.
Plant Cell 2006  18(3)  676-687
Cytoplasmic Male Sterility of Rice with Boro II Cytoplasm Is Caused by a Cytotoxic Peptide and Is Restored by Two Related PPR Motif Genes via Distinct Modes of mRNA Silencing.
Passardi,F., Longet,D., Penel,C. and Dunand,C.
Phytochemistry 2004  65(13)  1879-1893
The class III peroxidase multigenic family in rice and its evolution in land plants
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to proline( GO:0010238 )
cell wall modification( GO:0042545 )
response to water deprivation( GO:0009414 )
response to cold( GO:0009409 )
response to hormone stimulus( GO:0009725 )
ATPase activity( GO:0016887 )
peroxidase activity( GO:0004601 )
cell wall( GO:0005618 )
response to oxidative stress( GO:0006979 )
heme binding( GO:0020037 )
metal ion binding( GO:0046872 )
response to other organism( GO:0051707 )
Trait Ontology hydrogen peroxide content( TO:0000605 )
plant growth hormone sensitivity( TO:0000401 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
chromium sensitivity( TO:0000034 )
oxidative stress( TO:0002657 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 27, 2024

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