Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ADH2
Gene Symbol Synonym Adh2*, Adh2, OsADH2
CGSNL Gene Name ALCOHOL DEHYDROGENASE 2
Gene Name Synonym Alcohol dehydrogenase2, Alcohol dehydrogenase 2, Alcohol dehydrogenase-2
Protein Name ALCOHOL DEHYDROGENASE 2
Allele
Chromosome No. 11
Explanation Dimer. P & C(ST-H). EC=1.1.1.1 Q4R1E8(indica). Q0ITW7(japonica). AF148602-AF148632 (O.stiva and other wild rice species). M36469. X16297. AB208516-AB208542 (Oryza rufipogon and other rice species). AY169483-AY169492 (wild rice species). FJ266019-FJ266028 (indica and other wild rice species).
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK102799
MSU ID LOC_Os11g10510.1
LOC_Os11g10510.2
RAP ID Os11g0210500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Kaspary T.E., Roma-Burgos N., Merotto A.
Genes (Basel) 2020  11(9) 
Snorkeling Strategy: Tolerance to Flooding in Rice and Potential Application for Weed Management.
Lin C.C., Chao Y.T., Chen W.C., Ho H.Y., Chou M.Y., Li Y.R., Wu Y.L., Yang H.A., Hsieh H., Lin C.S., Wu F.H., Chou S.J., Jen H.C., Huang Y.H., Irene D., Wu W.J., Wu J.L., Gibbs D.J., Ho M.C., Shih M.C.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(8)  3300-3309
Regulatory cascade involving transcriptional and N-end rule pathways in rice under submergence.
Fukushima S., Mori M., Sugano S., Takatsuji H.
Plant Cell Physiol. 2016  57(12)  2541-2551
Transcription Factor WRKY62 Plays a Role in Pathogen Defense and Hypoxia-Responsive Gene Expression in Rice.
Ammiraju,J.S., Lu,F., Sanyal,A., Yu,Y., Song,X., Jiang,N., Pontaroli,A.C., Rambo,T., Currie,J., Collura,K., Talag,J., Fan,C., Goicoechea,J.L., Zuccolo,A., Chen,J., Bennetzen,J.L., Chen,M., Jackson,S. and Wing,R.A.
Plant Cell 2008  20(12)  3191-3209
Dynamic Evolution of Oryza Genomes Is Revealed by Comparative Genomic Analysis of a Genus-Wide Vertical Data Set
Terada,R., Johzuka-Hisatomi,Y., Saitoh,M., Asao,H. and Iida,S.
Plant Physiol. 2007  144(2)  846-856
Gene targeting by homologous recombination as a biotechnological tool for rice functional genomics
Yoshida,K. and Miyashita,N.T.
Theor. Appl. Genet. 2005  111(6)  1215-1228
Nucleotide polymorphism in the Adh2 region of the wild rice Oryza rufipogon.
Guo,Y.L. and Ge,S.
Am. J. Bot. 2005  92(9)  1548-1558
Molecular phylogeny of Oryzeae (Poaceae) based on DNA sequences from chloroplast, mitochondrial, and nuclear genomes
Bao,Y. and Ge,S.
Plant Syst. Evol. 2004  249(1-2)  55-66
Origin and phylogeny of Oryza species with the CD genome based on multiple-gene sequence data
Tarchini,R., Biddle,P., Wineland,R., Tingey,S. and Rafalski,A.
Plant Cell 2000  12(3)  381-391
The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4.
Ge,S., Sang,T., Lu,B.R. and Hong,D.Y.
Proc. Natl. Acad. Sci. U.S.A. 1999  96(25)  14400-14405
Phylogeny of rice genomes with emphasis on origins of allotetraploid species.
Kurata, N., M. Yano, Y. Minobe and M. Gale
Bio/technology 1994  12  276-278.
Conservation of genome structure between rice and wheat.
Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991  82  481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
Xie,Y. and Wu,R.
Gene 1990  87(2)  185-191
Molecular analysis of an alcohol dehydrogenase-encoding genomic clone (adh2) from rice.
Xie,Y. and Wu,R.
Plant Mol. Biol. 1989  13(1)  53-68
Rice alcohol dehydrogenase genes: anaerobic induction, organ specific expression and characterization of cDNA clones.
TextPresso Search Search textpresso for ADH2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060012
Ontologies
Gene Ontology ethylene mediated signaling pathway( GO:0009873 )
response to ethylene stimulus( GO:0009723 )
response to flooding( GO:0009413 )
alcohol dehydrogenase (NAD) activity( GO:0004022 )
alcohol dehydrogenase (acceptor) activity( GO:0018468 )
oxidation reduction( GO:0055114 )
cytoplasm( GO:0005737 )
zinc ion binding( GO:0008270 )
response to hypoxia( GO:0001666 )
Trait Ontology flooding related trait( TO:0000114 )
ethylene sensitivity( TO:0000173 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 12, 2021

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