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Basic Information
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CGSNL Gene Symbol
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CKX5
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Gene Symbol Synonym
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OsCKX5, ckx5
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CGSNL Gene Name
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CYTOKININ OXIDASE/DEHYDROGENASE 5
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Gene Name Synonym
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Putative cytokinin oxidase 5, cytokinin oxidase 5
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Protein Name
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CYTOKININ OXIDASE/DEHYDROGENASE 5
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Allele
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osckx5
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Chromosome No.
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1
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Explanation
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Q5ZAY9. GO:1901698: response to nitrogen compound. GO:1902347: response to strigolactone.
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Trait Class
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Character as QTL - Grain quality
Biochemical character
Vegetative organ - Culm
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK101022
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MSU ID
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LOC_Os01g56810.1
LOC_Os01g56810.2
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RAP ID
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Os01g0775400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Lu J., Jiang Z., Chen J., Xie M., Huang W., Li J., Zhuang C., Liu Z., Zheng S.
Plant Physiol. 2023
SET DOMAIN GROUP 711-mediated H3K27me3 methylation of cytokinin metabolism genes regulates organ size in rice.
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Zheng X., Zhang S., Liang Y., Zhang R., Liu L., Qin P., Zhang Z., Wang Y., Zhou J., Tang X., Zhang Y.
Plant Genome 2023 e20283
Loss-function mutants of OsCKX gene family based on CRISPR-Cas systems revealed their diversified roles in rice.
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Zha M., Zhao Y., Wang Y., Chen B., Tan Z.
Front Plant Sci 2022 13 837136
Strigolactones and Cytokinin Interaction in Buds in the Control of Rice Tillering.
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Mao C., He J., Liu L., Deng Q., Yao X., Liu C., Qiao Y., Li P., Ming F.
Plant Biotechnol. J. 2020 18(2) 429-442
OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development.
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Duan J., Yu H., Yuan K., Liao Z., Meng X., Jing Y., Liu G., Chu J., Li J.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(28) 14319-14324
Strigolactone promotes cytokinin degradation through transcriptional activation of <i>CYTOKININ OXIDASE/DEHYDROGENASE 9</i> in rice.
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He Q., Yang L., Hu W., Zhang J., Xing Y.
Sci Rep 2018 8(1) 14051
Overexpression of an auxin receptor OsAFB6 significantly enhanced grain yield by increasing cytokinin and decreasing auxin concentrations in rice panicle.
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Lu K., Wu B., Wang J., Zhu W., Nie H., Qian J., Huang W., Fang Z.
Plant Biotechnol. J. 2018
Blocking amino acid transporter OsAAP3 improves grain yield by promoting outgrowth buds and increasing tiller number in rice.
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Huang Y., Bai X., Luo M., Xing Y.
J Integr Plant Biol 2018
short panicle 3 controls panicle architecture by upregulating APO2/RFL and increasing cytokinin content in rice.
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Sun P., Zhang W., Wang Y., He Q., Shu F., Liu H., Wang J., Wang J., Yuan L., Deng H.
J Integr Plant Biol 2016
OsGRF4 controls grain shape, panicle length and seed shattering in rice.
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Xu J., Zha M., Li Y., Ding Y., Chen L., Ding C., Wang S.
Plant Cell Rep. 2015 34(9) 1647-62
The interaction between nitrogen availability and auxin, cytokinin, and strigolactone in the control of shoot branching in rice (Oryza sativa L.).
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Tsai Y.C., Weir N.R., Hill K., Zhang W., Kim H.J., Shiu S.H., Schaller G.E., Kieber J.J.
Plant Physiol. 2012 158(4) 1666-84
Characterization of genes involved in cytokinin signaling and metabolism from rice.
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Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007 48(3) 523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
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Ashikari,M., Sakakibara,H., Lin,S., Yamamoto,T., Takashi,T., Nishimura,A., Angeles,E.R., Qian,Q., Kitano,H. and Matsuoka,M.
Science 2005 309(5735) 741-745
Cytokinin oxidase regulates rice grain production.
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DB Reference
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Gramene ID
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GR:0020054
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Ontologies
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Gene Ontology
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response to starvation( GO:0042594 )
secretion by cell( GO:0032940 )
plastid( GO:0009536 )
oxidoreductase activity( GO:0016491 )
cytokinin dehydrogenase activity( GO:0019139 )
electron transport chain( GO:0022900 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
extracellular space( GO:0005615 )
UDP-N-acetylmuramate dehydrogenase activity( GO:0008762 )
jasmonic acid metabolic process( GO:0009694 )
response to jasmonic acid stimulus( GO:0009753 )
response to hormone stimulus( GO:0009725 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
cytokinin catabolic process( GO:0009823 )
FAD binding( GO:0050660 )
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Trait Ontology
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nitrogen sensitivity( TO:0000011 )
cytokinin sensitivity( TO:0000167 )
auxin sensitivity( TO:0000163 )
plant growth hormone sensitivity( TO:0000401 )
cytokinin content( TO:0002660 )
plant height( TO:0000207 )
chalky endosperm( TO:0000266 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Mar 6, 2025
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Update info.