Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol YSL5
Gene Symbol Synonym OsYSL5, OsYs9
CGSNL Gene Name YELLOW STRIP-LIKE GENE 5
Gene Name Synonym rice YSL (yellow stripe-like) gene 5, Probable metal-nicotianamine transporter YSL5, Protein YELLOW STRIPE LIKE 5, yellow stripe 1-like transporter 5
Protein Name PROBABLE METAL-NICOTIANAMINE TRANSPORTER YSL5
Allele
Chromosome No. 4
Explanation AB190915. Q7XRV1.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK108750
MSU ID LOC_Os04g32060.1
LOC_Os04g32060.2
RAP ID Os04g0390600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Nozoye T,Nagasaka S,Kobayashi T,Takahashi M,Sato Y,Sato Y,Uozumi N,Nakanishi H,Nishizawa NK
J. Biol. Chem. 2011  286(7)  5446-54
Phytosiderophore efflux transporters are crucial for iron acquisition in graminaceous plants.
Aoyama T,Kobayashi T,Takahashi M,Nagasaka S,Usuda K,Kakei Y,Ishimaru Y,Nakanishi H,Mori S,Nishizawa NK
Plant Mol. Biol. 2009  70  681-92
OsYSL18 is a rice iron(III)-deoxymugineic acid transporter specifically expressed in reproductive organs and phloem of lamina joints.
Narayanan NN, Vasconcelos MW, Grusak MA.
Plant Physiol. Biochem. 2007  45(5)  277-86.
Expression profiling of Oryza sativa metal homeostasis genes in different rice cultivars using a cDNA macroarray.
Koike, S., H. Inoue, D. Mizuno, M. Takahashi, M. Nakanishi, S. Mori and N.K. Nishizawa
Plant J. 2004  39 (3)  415-424
OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem.
Gross,J., Stein,J.R., Fett-Neto,A.G. and Fett,J.P.
Genet. Mol. Biol. 2003  26(4)  477-497
Iron homeostasis related genes in rice
DB Reference
Gramene ID -
Ontologies
Gene Ontology membrane( GO:0016020 )
transmembrane transport( GO:0055085 )
integral to membrane( GO:0016021 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Dec 11, 2013

/rice/oryzabase