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Basic Information
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CGSNL Gene Symbol
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YSL16
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Gene Symbol Synonym
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OsYSL16, Os-YSL16, OsYs14
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CGSNL Gene Name
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YELLOW STRIP-LIKE GENE 16
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Gene Name Synonym
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rice YSL (yellow stripe-like) gene 16, Probable metal-nicotianamine transporter YSL16, Protein YELLOW STRIPE LIKE 16, yellow stripe 1-like transporter 16, Yellow stripe-like16, Yellow Stripe1-Like 16
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Protein Name
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PROBABLE METAL-NICOTIANAMINE TRANSPORTER YSL16
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Allele
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osysl16-1, osysl16
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Chromosome No.
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4
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Explanation
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AB190924. Q7XN54. AB673450. AU082725, AU082724. TO:0020092: copper content trait. GO:1904583: response to polyamine macromolecule. TO:0020098: nitrate sensitivity.
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Trait Class
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Biochemical character
Reproductive organ - Pollination, fertilization, fertility
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK070304
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MSU ID
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LOC_Os04g45900.1
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RAP ID
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Os04g0542800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cui X., He H., Hu S., Zhang B., Cai H.
Plants (Basel) 2022 11(19)
Synergistic Interaction between Copper and Nitrogen-Uptake, Translocation, and Distribution in Rice Plant.
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Liang G., Zhang H., Li Y., Pu M., Yang Y., Li C., Lu C., Xu P., Yu D.
J Integr Plant Biol 2020 62(5) 668-689
Oryza sativa FER-LIKE FE DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (OsFIT/OsbHLH156) interacts with OsIRO2 to regulate iron homeostasis.
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Wang S., Li L., Ying Y., Wang J., Shao J.F., Yamaji N., Whelan J., Ma J.F., Shou H.
New Phytol. 2020 225(3) 1247-1260
A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localising IRO2 to the nucleus in rice.
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Miyamoto M., Shimao S., Tong W., Motose H., Takahashi T.
Plants (Basel) 2019 8(8)
Effect of Thermospermine on the Growth and Expression of Polyamine-Related Genes in Rice Seedlings.
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Zhang C., Lu W., Yang Y., Shen Z., Ma J.F., Zheng L.
Plant Cell Physiol. 2018 59(10) 2039-2051
OsYSL16 is Required for Preferential Cu Distribution to Floral Organs in Rice.
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Zheng L., Yamaji N., Yokosho K., Ma J.F.
Plant Cell 2012 24(9) 3767-82
YSL16 is a phloem-localized transporter of the copper-nicotianamine complex that is responsible for copper distribution in rice.
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Lee S., Ryoo N., Jeon J.S., Guerinot M.L., An G.
Mol. Cells 2012 33(2) 117-26
Activation of rice Yellow Stripe1-Like 16 (OsYSL16) enhances iron efficiency.
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Kakei Y., Ishimaru Y., Kobayashi T., Yamakawa T., Nakanishi H., Nishizawa N.K.
Plant Mol. Biol. 2012 79(6) 583-94
OsYSL16 plays a role in the allocation of iron.
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Liu T., Zeng J., Xia K., Fan T., Li Y., Wang Y., Xu X., Zhang M.
Rice (N Y) 2012 5 12
Evolutionary expansion and functional diversification of oligopeptide transporter gene family in rice
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Aoyama T,Kobayashi T,Takahashi M,Nagasaka S,Usuda K,Kakei Y,Ishimaru Y,Nakanishi H,Mori S,Nishizawa NK
Plant Mol. Biol. 2009 70 681-92
OsYSL18 is a rice iron(III)-deoxymugineic acid transporter specifically expressed in reproductive organs and phloem of lamina joints.
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Narayanan NN, Vasconcelos MW, Grusak MA.
Plant Physiol. Biochem. 2007 45(5) 277-86.
Expression profiling of Oryza sativa metal homeostasis genes in different rice cultivars using a cDNA macroarray.
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Koike, S., H. Inoue, D. Mizuno, M. Takahashi, M. Nakanishi, S. Mori and N.K. Nishizawa
Plant J. 2004 39 (3) 415-424
OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem.
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Gross,J., Stein,J.R., Fett-Neto,A.G. and Fett,J.P.
Genet. Mol. Biol. 2003 26(4) 477-497
Iron homeostasis related genes in rice
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TextPresso Search
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Search textpresso for YSL16
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to nitrate( GO:0010167 )
response to ammonium ion( GO:0060359 )
transmembrane transport( GO:0055085 )
membrane( GO:0016020 )
integral to membrane( GO:0016021 )
copper-nicotianamine transmembrane transporter activity( GO:0051982 )
pollen germination( GO:0009846 )
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Trait Ontology
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pollen fertility( TO:0000421 )
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Plant Ontology
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spikelet rachilla( PO:0009080 )
palea( PO:0009038 )
lemma( PO:0009037 )
vascular bundle( PO:0005020 )
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Related Strains
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Phenotype images
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Last updated
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Feb 8, 2023
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