Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol YSL16
Gene Symbol Synonym OsYSL16, Os-YSL16, OsYs14
Gene Name Synonym rice YSL (yellow stripe-like) gene 16, Probable metal-nicotianamine transporter YSL16, Protein YELLOW STRIPE LIKE 16, yellow stripe 1-like transporter 16, Yellow stripe-like16, Yellow Stripe1-Like 16
Allele osysl16-1, osysl16
Chromosome No. 4
Explanation AB190924. Q7XN54. AB673450. AU082725, AU082724. TO:0020092: copper content trait. GO:1904583: response to polyamine macromolecule. TO:0020098: nitrate sensitivity.
Trait Class Biochemical character
Reproductive organ - Pollination, fertilization, fertility
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK070304
MSU ID LOC_Os04g45900.1
RAP ID Os04g0542800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Cui X., He H., Hu S., Zhang B., Cai H.
Plants (Basel) 2022  11(19) 
Synergistic Interaction between Copper and Nitrogen-Uptake, Translocation, and Distribution in Rice Plant.
Liang G., Zhang H., Li Y., Pu M., Yang Y., Li C., Lu C., Xu P., Yu D.
J Integr Plant Biol 2020  62(5)  668-689
Oryza sativa FER-LIKE FE DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (OsFIT/OsbHLH156) interacts with OsIRO2 to regulate iron homeostasis.
Wang S., Li L., Ying Y., Wang J., Shao J.F., Yamaji N., Whelan J., Ma J.F., Shou H.
New Phytol. 2020  225(3)  1247-1260
A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localising IRO2 to the nucleus in rice.
Miyamoto M., Shimao S., Tong W., Motose H., Takahashi T.
Plants (Basel) 2019  8(8) 
Effect of Thermospermine on the Growth and Expression of Polyamine-Related Genes in Rice Seedlings.
Zhang C., Lu W., Yang Y., Shen Z., Ma J.F., Zheng L.
Plant Cell Physiol. 2018  59(10)  2039-2051
OsYSL16 is Required for Preferential Cu Distribution to Floral Organs in Rice.
Zheng L., Yamaji N., Yokosho K., Ma J.F.
Plant Cell 2012  24(9)  3767-82
YSL16 is a phloem-localized transporter of the copper-nicotianamine complex that is responsible for copper distribution in rice.
Lee S., Ryoo N., Jeon J.S., Guerinot M.L., An G.
Mol. Cells 2012  33(2)  117-26
Activation of rice Yellow Stripe1-Like 16 (OsYSL16) enhances iron efficiency.
Kakei Y., Ishimaru Y., Kobayashi T., Yamakawa T., Nakanishi H., Nishizawa N.K.
Plant Mol. Biol. 2012  79(6)  583-94
OsYSL16 plays a role in the allocation of iron.
Liu T., Zeng J., Xia K., Fan T., Li Y., Wang Y., Xu X., Zhang M.
Rice (N Y) 2012  5  12
Evolutionary expansion and functional diversification of oligopeptide transporter gene family in rice
Aoyama T,Kobayashi T,Takahashi M,Nagasaka S,Usuda K,Kakei Y,Ishimaru Y,Nakanishi H,Mori S,Nishizawa NK
Plant Mol. Biol. 2009  70  681-92
OsYSL18 is a rice iron(III)-deoxymugineic acid transporter specifically expressed in reproductive organs and phloem of lamina joints.
Narayanan NN, Vasconcelos MW, Grusak MA.
Plant Physiol. Biochem. 2007  45(5)  277-86.
Expression profiling of Oryza sativa metal homeostasis genes in different rice cultivars using a cDNA macroarray.
Koike, S., H. Inoue, D. Mizuno, M. Takahashi, M. Nakanishi, S. Mori and N.K. Nishizawa
Plant J. 2004  39 (3)  415-424
OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem.
Gross,J., Stein,J.R., Fett-Neto,A.G. and Fett,J.P.
Genet. Mol. Biol. 2003  26(4)  477-497
Iron homeostasis related genes in rice
TextPresso Search Search textpresso for YSL16 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to nitrate( GO:0010167 )
response to ammonium ion( GO:0060359 )
transmembrane transport( GO:0055085 )
membrane( GO:0016020 )
integral to membrane( GO:0016021 )
copper-nicotianamine transmembrane transporter activity( GO:0051982 )
pollen germination( GO:0009846 )
Trait Ontology pollen fertility( TO:0000421 )
Plant Ontology spikelet rachilla( PO:0009080 )
palea( PO:0009038 )
lemma( PO:0009037 )
vascular bundle( PO:0005020 )
Related Strains
Phenotype images
Last updated
Feb 8, 2023