Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol YSL13
Gene Symbol Synonym OsYSL13, OsYs12, Ys12
CGSNL Gene Name YELLOW STRIP-LIKE GENE 13
Gene Name Synonym rice YSL (yellow stripe-like) gene 13, Probable metal-nicotianamine transporter YSL13, Protein YELLOW STRIPE LIKE 13, yellow stripe 1-like transporter 13
Protein Name PROBABLE METAL-NICOTIANAMINE TRANSPORTER YSL13
Allele
Chromosome No. 4
Explanation AB164644. Q7XKF4. AU181651, BM421051, BI812310. GO:1990641: response to iron ion starvation.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK067235
MSU ID LOC_Os04g44300.1
LOC_Os04g44300.2
RAP ID Os04g0524500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Chowdhury R., Nallusamy S., Shanmugam V., Loganathan A., Muthurajan R., Subramanian Kizhaeral Sivathapandian, Paramasivam J., Duraialagaraja S.
Biologia 2022  77  39-53
Genome‐wide understanding of evolutionary and functional relationships of rice Yellow Stripe‐Like (YSL) transporter family in comparison with other plant species
Moon S.J., Park H.J., Kim T.H., Kang J.W., Lee J.Y., Cho J.H., Lee J.H., Park D.S., Byun M.O., Kim B.G., Shin D.
PLoS ONE 2018  13(11)  e0206910
OsTGA2 confers disease resistance to rice against leaf blight by regulating expression levels of disease related genes via interaction with NH1.
Liu T., Zeng J., Xia K., Fan T., Li Y., Wang Y., Xu X., Zhang M.
Rice (N Y) 2012  5  12
Evolutionary expansion and functional diversification of oligopeptide transporter gene family in rice
Aoyama T,Kobayashi T,Takahashi M,Nagasaka S,Usuda K,Kakei Y,Ishimaru Y,Nakanishi H,Mori S,Nishizawa NK
Plant Mol. Biol. 2009  70  681-92
OsYSL18 is a rice iron(III)-deoxymugineic acid transporter specifically expressed in reproductive organs and phloem of lamina joints.
Narayanan NN, Vasconcelos MW, Grusak MA.
Plant Physiol. Biochem. 2007  45(5)  277-86.
Expression profiling of Oryza sativa metal homeostasis genes in different rice cultivars using a cDNA macroarray.
Koike, S., H. Inoue, D. Mizuno, M. Takahashi, M. Nakanishi, S. Mori and N.K. Nishizawa
Plant J. 2004  39 (3)  415-424
OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem.
Gross,J., Stein,J.R., Fett-Neto,A.G. and Fett,J.P.
Genet. Mol. Biol. 2003  26(4)  477-497
Iron homeostasis related genes in rice
DB Reference
Gramene ID -
Ontologies
Gene Ontology iron ion homeostasis( GO:0055072 )
cellular response to iron ion starvation( GO:0010106 )
response to starvation( GO:0042594 )
membrane( GO:0016020 )
transmembrane transport( GO:0055085 )
integral to membrane( GO:0016021 )
response to salicylic acid stimulus( GO:0009751 )
Trait Ontology iron sensitivity( TO:0000224 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 17, 2026


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