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Basic Information
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CGSNL Gene Symbol
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YSL1
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Gene Symbol Synonym
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OsYSL1, OsYs1
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CGSNL Gene Name
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YELLOW STRIP-LIKE GENE 1
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Gene Name Synonym
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rice YSL (yellow stripe-like) gene 1, Probable metal-nicotianamine transporter YSL1, Protein YELLOW STRIPE LIKE 1, yellow stripe 1-like transporter 1
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Protein Name
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PROBABLE METAL-NICOTIANAMINE TRANSPORTER YSL1
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Allele
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Chromosome No.
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1
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Explanation
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Q9FTU1. AB190912. AU108928. TO:0006049: iron concentration. TO:0006053: zinc concentration.
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK121040
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MSU ID
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LOC_Os01g13710.1
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RAP ID
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Os01g0238700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Agarwal S., Tripura Venkata VG., Kotla A., Mangrauthia S.K., Neelamraju S.
Gene 2014 546(2) 430-6
Expression patterns of QTL based and other candidate genes in Madhukar × Swarna RILs with contrasting levels of iron and zinc in unpolished rice grains.
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Anuradha K., Agarwal S., Rao Y.V., Rao K.V., Viraktamath B.C., Sarla N.
Gene 2012 508(2) 233-40
Mapping QTLs and candidate genes for iron and zinc concentrations in unpolished rice of Madhukar×Swarna RILs.
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Nozoye T,Nagasaka S,Kobayashi T,Takahashi M,Sato Y,Sato Y,Uozumi N,Nakanishi H,Nishizawa NK
J. Biol. Chem. 2011 286(7) 5446-54
Phytosiderophore efflux transporters are crucial for iron acquisition in graminaceous plants.
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Aoyama T,Kobayashi T,Takahashi M,Nagasaka S,Usuda K,Kakei Y,Ishimaru Y,Nakanishi H,Mori S,Nishizawa NK
Plant Mol. Biol. 2009 70 681-92
OsYSL18 is a rice iron(III)-deoxymugineic acid transporter specifically expressed in reproductive organs and phloem of lamina joints.
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Koike, S., H. Inoue, D. Mizuno, M. Takahashi, M. Nakanishi, S. Mori and N.K. Nishizawa
Plant J. 2004 39 (3) 415-424
OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem.
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Gross,J., Stein,J.R., Fett-Neto,A.G. and Fett,J.P.
Genet. Mol. Biol. 2003 26(4) 477-497
Iron homeostasis related genes in rice
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TextPresso Search
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Search textpresso for YSL1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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transmembrane transport( GO:0055085 )
integral to membrane( GO:0016021 )
membrane( GO:0016020 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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Last updated
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Nov 27, 2014
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