Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RDR4
Gene Symbol Synonym OsRDR4, OsRDR3b
CGSNL Gene Name RNA-DEPENDENT RNA POLYMERASE 4
Gene Name Synonym RNA-dependent RNA polymerase 4, Probable RNA-dependent RNA polymerase 4
Protein Name RNA-DEPENDENT RNA POLYMERASE 4
Allele
Chromosome No. 1
Explanation EC=2.7.7.48 Q5QMN4. OsRDR3b in Zong et al. 2009 and Jiang et al. 2011.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK064209
MSU ID LOC_Os01g10140.2
LOC_Os01g10140.3
RAP ID Os01g0198000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiang L., Qian D., Zheng H., Meng L.Y., Chen J., Le W.J., Zhou T., Zhou Y.J., Wei C.H., Li Y.
Virus Res. 2012  163(2)  512-9
RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus.
Urayama S,Moriyama H,Aoki N,Nakazawa Y,Okada R,Kiyota E,Miki D,Shimamoto K,Fukuhara T
Plant Cell Physiol. 2010  51(1)  58-67
Knock-down of OsDCL2 in Rice Negatively Affects Maintenance of the Endogenous dsRNA Virus, Oryza sativa Endornavirus.
Zong J., Yao X., Yin J., Zhang D., Ma H.
Gene 2009  447(1)  29-39
Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for RDR4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA binding( GO:0003723 )
gene silencing by RNA( GO:0031047 )
RNA-directed RNA polymerase activity( GO:0003968 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 8, 2014

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