Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RDR3
Gene Symbol Synonym OsRDR3, OsRDR3a
CGSNL Gene Name RNA-DEPENDENT RNA POLYMERASE 3
Gene Name Synonym RNA-dependent RNA polymerase 3, Probable RNA-dependent RNA polymerase 3
Protein Name RNA-DEPENDENT RNA POLYMERASE 3
Allele
Chromosome No. 1
Explanation EC=2.7.7.48 Q5QMN5. OsRDR3a in Yang et al 2007, Zong et al. 2009 and Jiang et al. 2011.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK105570
MSU ID LOC_Os01g10130.1
RAP ID Os01g0197900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Jiang L., Qian D., Zheng H., Meng L.Y., Chen J., Le W.J., Zhou T., Zhou Y.J., Wei C.H., Li Y.
Virus Res. 2012  163(2)  512-9
RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus.
Urayama S,Moriyama H,Aoki N,Nakazawa Y,Okada R,Kiyota E,Miki D,Shimamoto K,Fukuhara T
Plant Cell Physiol. 2010  51(1)  58-67
Knock-down of OsDCL2 in Rice Negatively Affects Maintenance of the Endogenous dsRNA Virus, Oryza sativa Endornavirus.
Zong J., Yao X., Yin J., Zhang D., Ma H.
Gene 2009  447(1)  29-39
Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
Yang JH, Seo HH, Han SJ, Yoon EK, Yang MS, Lee WS.
Nucleic Acids Res. 2007  36(4)  1220-6.
Phytohormone abscisic acid control RNA-dependent RNA polymerase 6 gene expression and post-transcriptional gene silencing in rice cells.
TextPresso Search Search textpresso for RDR3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA binding( GO:0003723 )
RNA-directed RNA polymerase activity( GO:0003968 )
gene silencing by RNA( GO:0031047 )
response to abscisic acid stimulus( GO:0009737 )
Trait Ontology abscisic acid sensitivity( TO:0000615 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 13, 2016


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