Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RDR2
Gene Symbol Synonym OsRDR2
Gene Name Synonym RNA-dependent RNA polymerase 2, Probable RNA-dependent RNA polymerase 2
Allele rdr2-2
Chromosome No. 4
Explanation LOC_Os04g39160. EC= Q7XM31. targeted by osa-miR818 (Qin et al. 2017).
Trait Class Biochemical character
cDNA Accession No. AK064379
MSU ID LOC_Os04g39160.1
RAP ID Os04g0465700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Qin J., Tang Z., Ma X., Meng Y.
Gene 2017   
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism.
Wei L.a b, Gu L.a, Song X.a, Cui X.a b, Lu Z.a, Zhou M.a, Wang L.a, Hu F.c, Zhai J.d e, Meyers B.C.d e, Cao X.a
Proc. Natl. Acad. Sci. U.S.A. 2014  111  3877-3882
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice
Jiang L., Qian D., Zheng H., Meng L.Y., Chen J., Le W.J., Zhou T., Zhou Y.J., Wei C.H., Li Y.
Virus Res. 2012  163(2)  512-9
RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus.
Urayama S,Moriyama H,Aoki N,Nakazawa Y,Okada R,Kiyota E,Miki D,Shimamoto K,Fukuhara T
Plant Cell Physiol. 2010  51(1)  58-67
Knock-down of OsDCL2 in Rice Negatively Affects Maintenance of the Endogenous dsRNA Virus, Oryza sativa Endornavirus.
Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010  38(3)  465-75
DNA methylation mediated by a microRNA pathway.
Zong J., Yao X., Yin J., Zhang D., Ma H.
Gene 2009  447(1)  29-39
Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for RDR2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology RNA binding( GO:0003723 )
RNA-directed RNA polymerase activity( GO:0003968 )
gene silencing by RNA( GO:0031047 )
Trait Ontology gibberellic acid content( TO:0002675 )
brassinosteroid content( TO:0002676 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Jan 13, 2018