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Basic Information
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CGSNL Gene Symbol
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RDR2
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Gene Symbol Synonym
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OsRDR2
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CGSNL Gene Name
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RNA-DEPENDENT RNA POLYMERASE 2
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Gene Name Synonym
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RNA-dependent RNA polymerase 2, Probable RNA-dependent RNA polymerase 2
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Protein Name
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RNA-DEPENDENT RNA POLYMERASE 2
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Allele
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rdr2-2
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Chromosome No.
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4
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Explanation
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LOC_Os04g39160. EC=2.7.7.48 Q7XM31. targeted by osa-miR818 (Qin et al. 2017).
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK064379
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MSU ID
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LOC_Os04g39160.1
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RAP ID
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Os04g0465700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Qin J., Tang Z., Ma X., Meng Y.
Gene 2017
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism.
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Wei L.a b, Gu L.a, Song X.a, Cui X.a b, Lu Z.a, Zhou M.a, Wang L.a, Hu F.c, Zhai J.d e, Meyers B.C.d e, Cao X.a
Proc. Natl. Acad. Sci. U.S.A. 2014 111 3877-3882
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice
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Jiang L., Qian D., Zheng H., Meng L.Y., Chen J., Le W.J., Zhou T., Zhou Y.J., Wei C.H., Li Y.
Virus Res. 2012 163(2) 512-9
RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus.
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Urayama S,Moriyama H,Aoki N,Nakazawa Y,Okada R,Kiyota E,Miki D,Shimamoto K,Fukuhara T
Plant Cell Physiol. 2010 51(1) 58-67
Knock-down of OsDCL2 in Rice Negatively Affects Maintenance of the Endogenous dsRNA Virus, Oryza sativa Endornavirus.
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Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010 38(3) 465-75
DNA methylation mediated by a microRNA pathway.
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Zong J., Yao X., Yin J., Zhang D., Ma H.
Gene 2009 447(1) 29-39
Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups.
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Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008 9 451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
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TextPresso Search
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Search textpresso for RDR2
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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RNA binding( GO:0003723 )
RNA-directed RNA polymerase activity( GO:0003968 )
gene silencing by RNA( GO:0031047 )
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Trait Ontology
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gibberellic acid content( TO:0002675 )
brassinosteroid content( TO:0002676 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Jan 13, 2018
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