Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RDR1
Gene Symbol Synonym OsRDR1
CGSNL Gene Name RNA-DEPENDENT RNA POLYMERASE 1
Gene Name Synonym RNA-dependent RNA polymerase 1, Probable RNA-dependent RNA polymerase 1
Protein Name RNA-DEPENDENT RNA POLYMERASE 1
Allele
Chromosome No. 2
Explanation EC=2.7.7.48 Q0DXS3. LOC_Os02g50330.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK101440
MSU ID LOC_Os02g50330.1
RAP ID Os02g0736200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Wang L., Yuan J., Ma Y., Jiao W., Ye W., Yang D.L., Yi C., Chen Z.J.
Mol Plant 2018  11(2)  300-314
Rice Interploidy Crosses Disrupt Epigenetic Regulation, Gene Expression, and Seed Development.
Wang H., Jiao X., Kong X., Hamera S., Wu Y., Chen X., Fang R., Yan Y.
Plant Physiol. 2016  170(4)  2365-77
A Signaling Cascade from miR444 to RDR1 in Rice Antiviral RNA Silencing Pathway.
Jiang L., Qian D., Zheng H., Meng L.Y., Chen J., Le W.J., Zhou T., Zhou Y.J., Wei C.H., Li Y.
Virus Res. 2012  163(2)  512-9
RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus.
Urayama S,Moriyama H,Aoki N,Nakazawa Y,Okada R,Kiyota E,Miki D,Shimamoto K,Fukuhara T
Plant Cell Physiol. 2010  51(1)  58-67
Knock-down of OsDCL2 in Rice Negatively Affects Maintenance of the Endogenous dsRNA Virus, Oryza sativa Endornavirus.
Zong J., Yao X., Yin J., Zhang D., Ma H.
Gene 2009  447(1)  29-39
Evolution of the RNA-dependent RNA polymerase (RdRP) genes: duplications and possible losses before and after the divergence of major eukaryotic groups.
Quilis J, Penas G, Messeguer J, Brugidou C, San Segundo B.
Mol. Plant Microbe Interact. 2008  21(9)  1215-31.
The Arabidopsis AtNPR1 inversely modulates defense responses against fungal, bacterial, or viral pathogens while conferring hypersensitivity to abiotic stresses in transgenic rice.
Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008  9  451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
TextPresso Search Search textpresso for RDR1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA binding( GO:0003723 )
RNA-directed RNA polymerase activity( GO:0003968 )
gene silencing by RNA( GO:0031047 )
defense response to virus( GO:0051607 )
Trait Ontology viral disease resistance( TO:0000148 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 11, 2019


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